RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 HKDC1Q2TB90 917 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 FAM214AQ32MH5 1076 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 C22orf39Q6P5X5 142 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 GAREM2Q75VX8 874 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 METTL3Q86U44 580 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 LAX1Q8IWV1 398 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 NAGSQ8N159 534 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 CHST14Q8NCH0 376 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 ANGPTL6Q8NI99 470 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 BARHL1Q9BZE3 327 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 B3GNT4Q9C0J1 378 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 SLC22A4Q9H015 551 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 SMG9Q9H0W8 520 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 SPATA6Q9NWH7 488 aaPredicted RBP15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 SNX7Q9UNH6 387 aa15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 CFAP20Q9Y6A4 193 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-201ENST00000378133 SLC16A5O15375 505 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 CPNE3O75131 537 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 TNFRSF1BP20333 461 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SP140Q13342 867 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SSX1Q16384 188 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 CCSMST1Q4G0I0 132 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 CPTPQ5TA50 214 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 HTR3DQ70Z44 454 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 C1orf52Q8N6N3 182 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 NIPSNAP1Q9BPW8 284 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 CDCA4Q9BXL8 241 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 TOR4AQ9NXH8 423 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 POFUT2Q9Y2G5 429 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SCAMP2O15127 329 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 MYCP01106 439 aaPredicted RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 ADRA2AP08913 450 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 ANXA8P13928 327 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 GAB1Q13480 694 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 RAB33AQ14088 237 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 RGNQ15493 299 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 ANGPTL8Q6UXH0 198 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 LSM14AQ8ND56 463 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 GPR156Q8NFN8 814 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 WDR36Q8NI36 951 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 VANGL1Q8TAA9 524 aaPredicted RBP15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 UBASH3BQ8TF42 649 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 GON7Q9BXV9 100 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SRRQ9GZT4 340 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SGK2Q9HBY8 427 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SH3BP4Q9P0V3 963 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 SLC6A14Q9UN76 642 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 PADI2Q9Y2J8 665 aa15.89■□□□□ 0.13
PCDHA1-201ENST00000378133 OR6C70A6NIJ9 312 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 ARHGEF33A8MVX0 844 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TMEM229AB2RXF0 380 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 NRG2O14511 850 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 ADAMDEC1O15204 470 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 SGTAO43765 313 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 OPN1SWP03999 348 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 ANXA4P09525 319 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 IFNA8P32881 189 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 RORCP51449 518 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 PRMT2P55345 433 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 RAE1P78406 368 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TEKQ02763 1124 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 HYAL2Q12891 473 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 MPP7Q5T2T1 576 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TSEN54Q7Z6J9 526 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TMCO2Q7Z6W1 182 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 ASZ1Q8WWH4 475 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 MYLIPQ8WY64 445 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 COQ8BQ96D53 544 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 C11orf24Q96F05 449 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TMEM169Q96HH4 297 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 DOHHQ9BU89 302 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 CHST8Q9H2A9 424 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 SNTG1Q9NSN8 517 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 C1orf226A1L170 272 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 AGRPO00253 132 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 PCDH7O60245 1069 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 PQBP1O60828 265 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 GCM2O75603 506 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 MYL9P24844 172 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 Q6ZVU0 165 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TRIM48Q8IWZ4 208 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 CPXM2Q8N436 756 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 CPA6Q8N4T0 437 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 LILRA3Q8N6C8 439 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 OR4K3Q96R72 315 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 PRRG3Q9BZD7 231 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 STMN3Q9NZ72 180 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 NDUFAF4Q9P032 175 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 A0A0G2JMP0 313 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 UGDHO60701 494 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 POP4O95707 220 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 OR1E2P47887 323 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 RUNX1T1Q06455 604 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 AGTRAPQ6RW13 159 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 Q6ZVL8 140 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 TCEAL8Q8IYN2 117 aa15.88■□□□□ 0.13
PCDHA1-201ENST00000378133 CACTIN-AS1Q8N1I8 211 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms