RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 COPS7BQ9H9Q2 264 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-205ENST00000372244 STMN3Q9NZ72 180 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 LUZP4Q9P127 313 aa18.77■□□□□ 0.6
TMEM53-205ENST00000372244 A0A1B0GTL3 188 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 FOXO6A8MYZ6 492 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 CTNSO60931 367 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 SH3BGRLO75368 114 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 TAC1P20366 129 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 NEK2P51955 445 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 CUL3Q13618 768 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 DDX39BQ13838 428 aaKnown RBP18.77■□□□□ 0.59
TMEM53-205ENST00000372244 RCN2Q14257 317 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 GGTA1PQ4G0N0 100 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 RPS27LQ71UM5 84 aaKnown RBP18.77■□□□□ 0.59
TMEM53-205ENST00000372244 ARMC2Q8NEN0 867 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 NFAM1Q8NET5 270 aaPredicted RBP18.77■□□□□ 0.59
TMEM53-205ENST00000372244 ELP5Q8TE02 316 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 PCDHGA10Q9Y5H3 936 aa18.77■□□□□ 0.59
TMEM53-205ENST00000372244 TGFBR3LH3BV60 316 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 SAP18O00422 153 aaKnown RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 PLPP1O14494 284 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 IMPDH1P20839 514 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 ATP5F1P24539 256 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 SLCO1A2P46721 670 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 CDH13P55290 713 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 SLC26A5P58743 744 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 RPS13P62277 151 aaKnown RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 TLR1Q15399 786 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 C10orf62Q5T681 223 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 FRG2Q64ET8 278 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 MILR1Q7Z6M3 343 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 IQCKQ8N0W5 287 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 CATSPER1Q8NEC5 780 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 AENQ8WTP8 325 aaKnown RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 FRG2BQ96QU4 278 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 CSF3RQ99062 836 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 BARD1Q99728 777 aaKnown RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 MAPKAP1Q9BPZ7 522 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 ZNF717Q9BY31 904 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 RNF32Q9H0A6 362 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 ILKAPQ9H0C8 392 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 SEMA4BQ9NPR2 832 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 PRTFDC1Q9NRG1 225 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 ZNF225Q9UK10 706 aa18.76■□□□□ 0.59
TMEM53-205ENST00000372244 MRPS33Q9Y291 106 aaKnown RBP18.76■□□□□ 0.59
TMEM53-205ENST00000372244 ETHE1O95571 254 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 OTCP00480 354 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 PRKAA2P54646 552 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 PHEXP78562 749 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 UNC50Q53HI1 259 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 ZNF678Q5SXM1 525 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 ZCCHC7Q8N3Z6 543 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 FAM47BQ8NA70 645 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 OR4F6Q8NGB9 312 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 EPS8L3Q8TE67 593 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 SNRNP40Q96DI7 357 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 CENPKQ9BS16 269 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 SORBS1Q9BX66 1292 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 DDX31Q9H8H2 851 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 PLA2G3Q9NZ20 509 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 TEKT2Q9UIF3 430 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 EMCNQ9ULC0 261 aa18.75■□□□□ 0.59
TMEM53-205ENST00000372244 PPIEQ9UNP9 301 aaKnown RBP18.75■□□□□ 0.59
TMEM53-205ENST00000372244 DYTNA2CJ06 578 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SAGE2PA6NJ88 616 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 A8MUI8 341 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 CDH16O75309 829 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 WDPCPO95876 746 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 NUDT17P0C025 328 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 BSGP35613 385 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SSR2P43308 183 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 TNFSF10P50591 281 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 CLCQ05315 142 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SLC13A2Q13183 592 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SLAMF1Q13291 335 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 ZNF169Q14929 603 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-205ENST00000372244 TERF2Q15554 542 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 PRR30Q53SZ7 412 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-205ENST00000372244 ABHD17BQ5VST6 288 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SLC22A9Q8IVM8 553 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 CISD2Q8N5K1 135 aaKnown RBP18.74■□□□□ 0.59
TMEM53-205ENST00000372244 MYRIPQ8NFW9 859 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 C19orf60Q96EN9 201 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 ZNF354BQ96LW1 612 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 MAGEB10Q96LZ2 347 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-205ENST00000372244 NPAS2Q99743 824 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 CLMPQ9H6B4 373 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 KCNK13Q9HB14 408 aa18.74■□□□□ 0.59
TMEM53-205ENST00000372244 SHANK1Q9Y566 2161 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 BLACEA4D250 179 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 G3V2L1 256 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 CRHR1P34998 444 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 CCT5P48643 541 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 GPR143P51810 404 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 ACER2Q5QJU3 275 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 MRM1Q6IN84 353 aaKnown RBP18.73■□□□□ 0.59
TMEM53-205ENST00000372244 LETMD1Q6P1Q0 360 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 GALNT11Q8NCW6 608 aa18.73■□□□□ 0.59
TMEM53-205ENST00000372244 MTFMTQ96DP5 389 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms