RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CDC26Q8NHZ8 85 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-204ENST00000372066 SH3KBP1Q96B97 665 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 C1QTNF7Q9BXJ2 289 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 GABARAPL1Q9H0R8 117 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 TRIT1Q9H3H1 467 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 TPT1P8Q9HAU6 139 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 WASH6PQ9NQA3 447 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 FBXL12Q9NXK8 326 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 C3orf18Q9UK00 162 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RAXQ9Y2V3 346 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 IGLON5A6NGN9 336 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 H0Y8X5 98 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 PCDH8O95206 1070 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 CPSF4O95639 269 aaKnown RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 GNAO1P09471 354 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 SLC35G4P0C7Q5 338 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 KDELR2P33947 212 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 PCGF2P35227 344 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 TRIM23P36406 574 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 GRK6P43250 576 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 RAD23AP54725 363 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 C21orf59P57076 290 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 RBBP4Q09028 425 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 IL18R1Q13478 541 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ELOAQ14241 798 aaKnown RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 COL28A1Q2UY09 1125 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 OTUD3Q5T2D3 398 aaPredicted RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 KIAA0895LQ68EN5 471 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 KIAA1161Q6NSJ0 714 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ZCCHC8Q6NZY4 707 aaKnown RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 TBPL2Q6SJ96 375 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 CBLL1Q75N03 491 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 EIF3MQ7L2H7 374 aaKnown RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 FAM129CQ86XR2 697 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ZDHHC21Q8IVQ6 265 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ZNF555Q8NEP9 628 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ZFP90Q8TF47 636 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 SMPDL3AQ92484 453 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 FAM131CQ96AQ9 280 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 NRBF2Q96F24 287 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 AIF1LQ9BQI0 150 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 TIMM29Q9BSF4 260 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 RAB11FIP5Q9BXF6 653 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 RHBGQ9H310 441 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 WDR26Q9H7D7 661 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 DDX18Q9NVP1 670 aaKnown RBP13.44□□□□□ -0.26
LDB3-204ENST00000372066 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 ORC6Q9Y5N6 252 aa13.44□□□□□ -0.26
LDB3-204ENST00000372066 WDFY3Q8IZQ1 3526 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 TRABD2BA6NFA1 517 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 PCDHGA12O60330 932 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 TBX19O60806 448 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 DKK1O94907 266 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 SEMG1P04279 462 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 FURINP09958 794 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 CTSKP43235 329 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 ARHGDIAP52565 204 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 RPS21P63220 83 aaKnown RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 SFSWAPQ12872 951 aaKnown RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 FADDQ13158 208 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 TSTA3Q13630 321 aaPredicted RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 SHQ1Q6PI26 577 aaKnown RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 B3GNT6Q6ZMB0 384 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 PIWIL3Q7Z3Z3 882 aaKnown RBP13.43□□□□□ -0.26
LDB3-204ENST00000372066 PTOV1Q86YD1 416 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 CLECL1Q8IZS7 167 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 C10orf111Q8N326 155 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 PPCDCQ96CD2 204 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 FBXL20Q96IG2 436 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 QRFPRQ96P65 431 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 CHST8Q9H2A9 424 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 IL1RAPQ9NPH3 570 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 BAG5Q9UL15 447 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 SCML1Q9UN30 329 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 SH2B3Q9UQQ2 575 aa13.43□□□□□ -0.26
LDB3-204ENST00000372066 MYOCOSA0A1B0GUC4 107 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 VILLO15195 856 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 E2F6O75461 281 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 IGHV4-34P06331 123 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 DCTP40126 519 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 REEP5Q00765 189 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 LRRC23Q53EV4 343 aaPredicted RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 RBM48Q5RL73 367 aaKnown RBP13.42□□□□□ -0.26
LDB3-204ENST00000372066 OR2T5Q6IEZ7 315 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 FAM71E1Q6IPT2 247 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 PAGE2Q7Z2X7 111 aa13.42□□□□□ -0.26
LDB3-204ENST00000372066 ZNF551Q7Z340 670 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms