RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ABHD11Q8NFV4 315 aa27.6■■■□□ 2.01
SSBP3-204ENST00000371320 TM4SF18Q96CE8 201 aa27.6■■■□□ 2.01
SSBP3-204ENST00000371320 BCL7BQ9BQE9 202 aa27.6■■■□□ 2.01
SSBP3-204ENST00000371320 TRPV4Q9HBA0 871 aa27.6■■■□□ 2.01
SSBP3-204ENST00000371320 RNF6Q9Y252 685 aa27.6■■■□□ 2.01
SSBP3-204ENST00000371320 WBP11Q9Y2W2 641 aaKnown RBP27.6■■■□□ 2.01
SSBP3-204ENST00000371320 H7BY64 318 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 AXIN1O15169 862 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 CAPN5O15484 640 aaPredicted RBP27.59■■■□□ 2.01
SSBP3-204ENST00000371320 GABARAPO95166 117 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 VIPP01282 170 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 PSMB9P28065 219 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 WASP42768 502 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 ALDH9A1P49189 494 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 CLCA4Q14CN2 919 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 P3H2Q8IVL5 708 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 SLC30A8Q8IWU4 369 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 PRAP1Q96NZ9 151 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 MENTQ9BUN1 341 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 ACOT13Q9NPJ3 140 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 RLIMQ9NVW2 624 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 SH3GLB1Q9Y371 365 aa27.59■■■□□ 2.01
SSBP3-204ENST00000371320 PRAMEF33A0A0G2JMD5 474 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 PRAMEF10O60809 474 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 GGT2P36268 569 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 AGBL4Q5VU57 503 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 DUS1LQ6P1R4 473 aaKnown RBP27.58■■■□□ 2.01
SSBP3-204ENST00000371320 AHSA2Q719I0 299 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 OR5P2Q8WZ92 322 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 YIPF6Q96EC8 236 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 MBNL1Q9NR56 388 aaKnown RBP27.58■■■□□ 2.01
SSBP3-204ENST00000371320 SPATA7Q9P0W8 599 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 POFUT2Q9Y2G5 429 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 OR1A2Q9Y585 309 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 J3KTA2 159 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 ST13P50502 369 aaKnown RBP27.58■■■□□ 2.01
SSBP3-204ENST00000371320 MANFP55145 182 aaKnown RBP27.58■■■□□ 2.01
SSBP3-204ENST00000371320 MLLT10P55197 1068 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 REEP5Q00765 189 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 HEPACAMQ14CZ8 416 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 PLEKHA8Q96JA3 519 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 QRFPRQ96P65 431 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 PIP5K1AQ99755 562 aa27.58■■■□□ 2.01
SSBP3-204ENST00000371320 FAM32AQ9Y421 112 aaKnown RBP27.58■■■□□ 2.01
SSBP3-204ENST00000371320 SERPINB1P30740 379 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 PXNP49023 591 aaPredicted RBP27.57■■■□□ 2
SSBP3-204ENST00000371320 DGCR6Q14129 220 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 CST6Q15828 149 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 DUSP6Q16828 381 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 CEACAM20Q6UY09 585 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 C7orf61Q8IZ16 206 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 DNASE1L2Q92874 299 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 TEX101Q9BY14 249 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 SLAMF7Q9NQ25 335 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 STON1Q9Y6Q2 735 aa27.57■■■□□ 2
SSBP3-204ENST00000371320 TRBC2A0A5B9 178 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 PDPK1O15530 556 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 XCR1P46094 333 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 REEP3Q6NUK4 255 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 C16orf87Q6PH81 154 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 SLC15A4Q8N697 577 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 NATD1Q8N6N6 113 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 NEURL3Q96EH8 262 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 ABCG4Q9H172 646 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 WDR26Q9H7D7 661 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 CERS4Q9HA82 394 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 ACSL5Q9ULC5 683 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 A0A1W2PPV9 198 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 TBX19O60806 448 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 P2RY8Q86VZ1 359 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 ABTB1Q969K4 478 aaPredicted RBP27.56■■■□□ 2
SSBP3-204ENST00000371320 NIPSNAP1Q9BPW8 284 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 NT5DC2Q9H857 520 aa27.56■■■□□ 2
SSBP3-204ENST00000371320 KLHL33A6NCF5 533 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 SLC22A1O15245 554 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 SAXO2Q658L1 398 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 TRUB1Q8WWH5 349 aaKnown RBP27.55■■■□□ 2
SSBP3-204ENST00000371320 PDXPQ96GD0 296 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 FERD3LQ96RJ6 166 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 PITHD1Q9GZP4 211 aaPredicted RBP27.55■■■□□ 2
SSBP3-204ENST00000371320 ZNF556Q9HAH1 456 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 ACER3Q9NUN7 267 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 PCDHGA2Q9Y5H1 932 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 ENPP4Q9Y6X5 453 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 MAGEB3O15480 346 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 OR1F1O43749 312 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 DDX5P17844 614 aaKnown RBP27.55■■■□□ 2
SSBP3-204ENST00000371320 RPS26P62854 115 aaKnown RBP27.55■■■□□ 2
SSBP3-204ENST00000371320 FAM109BQ6ICB4 259 aaPredicted RBP27.55■■■□□ 2
SSBP3-204ENST00000371320 RAB42Q8N4Z0 105 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 RGMAQ96B86 450 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 NECTIN3Q9NQS3 549 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 WDR37Q9Y2I8 494 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 C2orf16Q68DN1 1984 aa27.55■■■□□ 2
SSBP3-204ENST00000371320 C5orf42Q9H799 3197 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 A8MVJ9 347 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 C5orf58C9J3I9 102 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 TNFAIP8L2Q6P589 184 aaPredicted RBP27.54■■■□□ 2
SSBP3-204ENST00000371320 NUDT13Q86X67 352 aa27.54■■■□□ 2
SSBP3-204ENST00000371320 PARP8Q8N3A8 854 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms