RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 FAM107BQ9H098 131 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ATG10Q9H0Y0 220 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 OSGEPL1Q9H4B0 414 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 KCNK13Q9HB14 408 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PLSCR4Q9NRQ2 329 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TRNAU1APQ9NX07 287 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ARL15Q9NXU5 204 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF624Q9P2J8 865 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZDHHC2Q9UIJ5 367 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF225Q9UK10 706 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PCTPQ9UKL6 214 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TMCO1Q9UM00 188 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PLAGL1Q9UM63 463 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 RUVBL1Q9Y265 456 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ATXN2Q99700 1313 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 CACNA1EQ15878 2313 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CABIN1Q9Y6J0 2220 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 FANCMQ8IYD8 2048 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TNRC6BQ9UPQ9 1833 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 PDZK1P1A8MUH7 402 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 F5H0A9 414 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 MYO1CO00159 1063 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 E2F3O00716 465 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 OR7A17O14581 309 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 BCAT2O15382 392 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 HSPA4LO95757 839 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 SLC16A8O95907 504 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 FAM107AO95990 144 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CATP04040 527 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 CSF2P04141 144 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CD1AP06126 327 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ANXA5P08758 320 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 SLC35G4P0C7Q5 338 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ALOX15P16050 662 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF28P17035 718 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 IMPA1P29218 277 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ACTR1BP42025 376 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 AP1S2P56377 157 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ACTR1AP61163 376 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 FASTKQ14296 549 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ANGPT1Q15389 498 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TAF11Q15544 211 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 KIF19Q2TAC6 998 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PTCHD3Q3KNS1 767 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF528Q3MIS6 628 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 UGT3A2Q3SY77 523 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 LYSMD4Q5XG99 296 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ANKS6Q68DC2 871 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 VASNQ6EMK4 673 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 IYDQ6PHW0 289 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 SLC30A9Q6PML9 568 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 AGTRAPQ6RW13 159 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 MAVSQ7Z434 540 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 GOLGA7Q7Z5G4 137 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CPLX4Q7Z7G2 160 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 SYVN1Q86TM6 617 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CUZD1Q86UP6 607 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PARGQ86W56 976 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 KLHDC8AQ8IYD2 350 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 C2orf73Q8N5S3 287 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 TEX9Q8N6V9 391 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZBTB44Q8NCP5 570 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PPFIBP2Q8ND30 876 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 OR9A1PQ8NGU1 263 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 MAPK15Q8TD08 544 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF473Q8WTR7 871 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZNF480Q8WV37 535 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 THAP4Q8WY91 577 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZCCHC14Q8WYQ9 949 aaKnown RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 PYCR2Q96C36 320 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PRR11Q96HE9 360 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 LCORQ96JN0 433 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 C12orf66Q96MD2 445 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 FOPNLQ96NB1 174 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 CAMK1GQ96NX5 476 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 IL17FQ96PD4 163 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 OR4K3Q96R72 315 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 EGFL8Q99944 293 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TREX2Q9BQ50 279 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 LRRC61Q9BV99 259 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 EPS8L2Q9H6S3 715 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 ZSCAN32Q9NX65 697 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 TAAR2Q9P1P5 351 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 STOX2Q9P2F5 926 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 MARCOQ9UEW3 520 aaPredicted RBP3.41□□□□□ -1.86
MCF2-202ENST00000370573 HAO1Q9UJM8 370 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PILRBQ9UKJ0 227 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 ASF1AQ9Y294 204 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
MCF2-202ENST00000370573 PI4KAP42356 2102 aa3.4□□□□□ -1.86
MCF2-202ENST00000370573 A0A1B0GTW7 788 aa3.4□□□□□ -1.86
MCF2-202ENST00000370573 E7ENX8 843 aa3.4□□□□□ -1.86
MCF2-202ENST00000370573 DNPH1O43598 174 aa3.4□□□□□ -1.86
MCF2-202ENST00000370573 NRP2O60462 931 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms