RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SERTM1A2A2V5 107 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 OR5K3A6NET4 321 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 INSIG1O15503 277 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 PDPK1O15530 556 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 KDELR3O43731 214 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 OR2B3O76000 313 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 CSF3P09919 207 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 CRISP3P54108 245 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 MICAQ29983 383 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 ZMAT1Q5H9K5 638 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 PLET1Q6UQ28 207 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 HSDL2Q6YN16 418 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 ZNF782Q6ZMW2 699 aaPredicted RBP18.25■□□□□ 0.51
CMTM3-201ENST00000361909 MAP6Q96JE9 813 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 FCRL1Q96LA6 429 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 VPS35Q96QK1 796 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 CNPPD1Q9BV87 410 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 CINPQ9BW66 212 aaPredicted RBP18.25■□□□□ 0.51
CMTM3-201ENST00000361909 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 EXOSC4Q9NPD3 245 aaKnown RBP18.25■□□□□ 0.51
CMTM3-201ENST00000361909 MRPL39Q9NYK5 338 aaKnown RBP18.25■□□□□ 0.51
CMTM3-201ENST00000361909 SH3BP4Q9P0V3 963 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 PHF11Q9UIL8 331 aa18.25■□□□□ 0.51
CMTM3-201ENST00000361909 A0A0B4J293 547 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 A0A0D9SEW6 157 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 ARRDC5A6NEK1 342 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 LOC730098B7Z3J9 87 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 RHOCP08134 193 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 EPCAMP16422 314 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 ALAS2P22557 587 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 AZGP1P25311 298 aaKnown RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 HOXD9P28356 352 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 CSTF2P33240 577 aaKnown RBP eCLIP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 SGSHP51688 502 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 C21orf58P58505 322 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 ARHGAP15Q53QZ3 475 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 MPP7Q5T2T1 576 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 MZT2BQ6NZ67 158 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 UTP15Q8TED0 518 aaKnown RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 SLC25A46Q96AG3 418 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 AP2M1Q96CW1 435 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 RNF31Q96EP0 1072 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 MAGEB10Q96LZ2 347 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 TSSK3Q96PN8 268 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 TIGARQ9NQ88 270 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 NDUFB11Q9NX14 153 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 RHOP08100 348 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 CCNYL3P0C7X3 344 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 CCR2P41597 374 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 TAGLNQ01995 201 aaKnown RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 TAB1Q15750 504 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 NATD1Q8N6N6 113 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 OR8J2Q8NGG1 315 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 LMAN2LQ9H0V9 348 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 THSD1Q9NS62 852 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 HCFC1R1Q9NWW0 138 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 SSR3Q9UNL2 185 aa18.24■□□□□ 0.51
CMTM3-201ENST00000361909 LSM2Q9Y333 95 aaKnown RBP18.24■□□□□ 0.51
CMTM3-201ENST00000361909 HELZP42694 1942 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 LAMA2P24043 3122 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 PRR23AA6NEV1 266 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 TSPAN3O60637 253 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 GUCA1CO95843 209 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 ZNF7P17097 686 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 BTBD16Q32M84 506 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 DDI2Q5TDH0 399 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 SAXO2Q658L1 398 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 PTRHD1Q6GMV3 140 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 CXorf57Q6NSI4 855 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 GRAMD2AQ8IUY3 354 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 LGI4Q8N135 537 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 DNAJA4Q8WW22 397 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 SELENOMQ8WWX9 145 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 NDUFAF4Q9P032 175 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 CFAP97Q9P2B7 532 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 YBX2Q9Y2T7 364 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 PCDHB11Q9Y5F2 797 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 FABP12A6NFH5 140 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 TBL1XO60907 577 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 STK16O75716 305 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 PDYNP01213 254 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 GJA1P17302 382 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 CR2P20023 1033 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 PTBP1P26599 531 aaKnown RBP eCLIP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 MAP2K3P46734 347 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 MAB21L1Q13394 359 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 SUZ12Q15022 739 aaKnown RBP18.23■□□□□ 0.51
CMTM3-201ENST00000361909 FAM92BQ6ZTR7 304 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 CMTM8Q8IZV2 173 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 DUSP18Q8NEJ0 188 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 AP3S1Q92572 193 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 HYLS1Q96M11 299 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 MND1Q9BWT6 205 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 UCK2Q9BZX2 261 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 CHST8Q9H2A9 424 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 TEKT2Q9UIF3 430 aa18.23■□□□□ 0.51
CMTM3-201ENST00000361909 SCN8AQ9UQD0 1980 aa18.22■□□□□ 0.51
CMTM3-201ENST00000361909 LEUTXA8MZ59 168 aa18.22■□□□□ 0.51
CMTM3-201ENST00000361909 LEFTY2O00292 366 aa18.22■□□□□ 0.51
CMTM3-201ENST00000361909 SCAMP3O14828 347 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms