RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PLEKHB1Q9UF11 243 aaPredicted RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 IGLV3-10A0A075B6K4 115 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 EPOPA6NHQ4 379 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 IQCF5A8MTL0 148 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 TPST2O60704 377 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 AP2A2O94973 939 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 LRATO95237 230 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 CLDN9O95484 217 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 ACPPP15309 386 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 CDH12P55289 794 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 YBEYP58557 167 aaPredicted RBP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PPP3R1P63098 170 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 BAMBIQ13145 260 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 DOC2BQ14184 412 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 TEAD4Q15561 434 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 EXOC3L2Q2M3D2 409 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 TMEM65Q6PI78 240 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 SCD5Q86SK9 330 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 SLC34A3Q8N130 599 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 TTC16Q8NEE8 873 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF680Q8NEM1 530 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 SELENOMQ8WWX9 145 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PIGUQ9H490 435 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF576Q9H609 170 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 NLKQ9UBE8 527 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 CLCA3PQ9Y6N3 262 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PDYNP01213 254 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PRPS1L1P21108 318 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PPIBP23284 216 aaKnown RBP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PRPH2P23942 346 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PTBP1P26599 531 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PCGF2P35227 344 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 GDF5P43026 501 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 MAN2A2P49641 1150 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 SELENOWP63302 87 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 NCF4Q15080 339 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 KLHL12Q53G59 568 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 BICRALQ6AI39 1079 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 METAP1DQ6UB28 335 aaPredicted RBP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 PLEKHM3Q6ZWE6 761 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 FAM217AQ8IXS0 508 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 GHDCQ8N2G8 530 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 Q8N402 240 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 FAM46DQ8NEK8 389 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 UPRTQ96BW1 309 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 MSANTD3Q96H12 275 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 ZFP42Q96MM3 310 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 POLR2J2Q9GZM3 115 aaKnown RBP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 P2RY12Q9H244 342 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 CRISPLD1Q9H336 500 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 FAM120CQ9NX05 1096 aaKnown RBP14.29□□□□□ -0.12
UBAP1-202ENST00000359544 CACNG4Q9UBN1 327 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 RWDD3Q9Y3V2 267 aa14.29□□□□□ -0.12
UBAP1-202ENST00000359544 DOCK4Q8N1I0 1966 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZAR1LA6NP61 321 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 SLC9A3R1O14745 358 aaPredicted RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 RPLP2P05387 115 aaKnown RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TACR1P25103 407 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 EVI2BP34910 448 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TBX4P57082 545 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 SF3A2Q15428 464 aaKnown RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 BBS7Q8IWZ6 715 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 GPALPP1Q8IXQ4 340 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 OR52J3Q8NH60 311 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 CSGALNACT1Q8TDX6 532 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF431Q8TF32 576 aaPredicted RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 MED18Q9BUE0 208 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PPIL3Q9H2H8 161 aaKnown RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 RANBP3Q9H6Z4 567 aaPredicted RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 FOLH1BQ9HBA9 442 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 SLC25A19Q9HC21 320 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TXNL4BQ9NX01 149 aaKnown RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PTTG3PQ9NZH4 202 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TRAV19A0A0A6YYK7 116 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PRMT3O60678 531 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 MSL3P1P0C860 447 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 CKMT1AP12532 417 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 SSTR4P31391 388 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 INPP1P49441 399 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ABATP80404 500 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 GALEQ14376 348 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF267Q14586 743 aaPredicted RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 COL28A1Q2UY09 1125 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 RNLSQ5VYX0 342 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TSEN54Q7Z6J9 526 aaKnown RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 COMMD7Q86VX2 200 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PHOSPHO2Q8TCD6 241 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 CREB3L1Q96BA8 519 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 ZBED6CLQ96FA7 236 aaPredicted RBP14.28□□□□□ -0.12
UBAP1-202ENST00000359544 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 RTP3Q9BQQ7 232 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms