RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TM9SF4Q92544 642 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 GTPBP3Q969Y2 492 aaKnown RBP12.7□□□□□ -0.38
IFT88-202ENST00000351808 KCTD7Q96MP8 289 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ERMAPQ96PL5 475 aaPredicted RBP12.7□□□□□ -0.38
IFT88-202ENST00000351808 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 CD93Q9NPY3 652 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 GPRC5BQ9NZH0 403 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 PRKAG2Q9UGJ0 569 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 PHF11Q9UIL8 331 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 POFUT2Q9Y2G5 429 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 CCL27Q9Y4X3 112 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 MATN3O15232 486 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 KDM4BO94953 1096 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 AQP1P29972 269 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 CCR1P32246 355 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 STK19P49842 368 aaPredicted RBP12.7□□□□□ -0.38
IFT88-202ENST00000351808 ATP12AP54707 1039 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 CDC42P60953 191 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ITKQ08881 620 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 DGKKQ5KSL6 1271 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 RNF34Q969K3 372 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 GPR21Q99679 349 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ABCG8Q9H221 673 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ABCG5Q9H222 651 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
IFT88-202ENST00000351808 SH3D21A4FU49 640 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 YJEFN3A6XGL0 299 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 GPR171O14626 319 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SELENOFO60613 162 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 KCNK5O95279 499 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 S100A3P33764 101 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 CNR2P34972 360 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 CAMK1Q14012 370 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 PABPC1L2AQ5JQF8 200 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SPOUT1Q5T280 376 aaKnown RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 TMEM91Q6ZNR0 172 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 GPSM1Q86YR5 675 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 LGI4Q8N135 537 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 TMEM163Q8TC26 289 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SENP5Q96HI0 755 aaPredicted RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 UROC1Q96N76 676 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SLC39A8Q9C0K1 460 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 WDCPQ9H6R7 721 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 MPP6Q9NZW5 540 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 IGKV6D-21A0A0A0MT36 114 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 TEX13CA0A0J9YWL9 993 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 LOC285095A0A1B0GVY8 99 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 GABRDO14764 452 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 KLK8O60259 260 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 FGF2P09038 288 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 DEFA5Q01523 94 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 TSEN54Q7Z6J9 526 aaKnown RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 OR5T2Q8NGG2 359 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 MOSPD2Q8NHP6 518 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SPPL2AQ8TCT8 520 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 OSMRQ99650 979 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
IFT88-202ENST00000351808 DNAJC27Q9NZQ0 273 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 SLC9A8Q9Y2E8 581 aa12.69□□□□□ -0.38
IFT88-202ENST00000351808 RAB19A4D1S5 217 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 OR7A17O14581 309 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 NCR1O76036 304 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 CD86P42081 329 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 BDKRB1P46663 353 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 CDH12P55289 794 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 KCNJ10P78508 379 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 TTLL9Q3SXZ7 439 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 USP45Q70EL2 814 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 EDEM1Q92611 657 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 ATG4CQ96DT6 458 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 FDXACB1Q9BRP7 624 aaPredicted RBP12.68□□□□□ -0.38
IFT88-202ENST00000351808 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
IFT88-202ENST00000351808 POPDC3Q9HBV1 291 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 TAS2R13Q9NYV9 303 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 GPR160Q9UJ42 338 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 RFXANKO14593 260 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 LDB2O43679 373 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 ANXA8P13928 327 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 BPIP17213 487 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 LCN1P31025 176 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 CLDN8P56748 225 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 TSPAN5P62079 268 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 MLLT11Q13015 90 aaPredicted RBP12.68□□□□□ -0.38
IFT88-202ENST00000351808 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
IFT88-202ENST00000351808 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 CRTC2Q53ET0 693 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms