RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZNF707Q96C28 371 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ZIC5Q96T25 663 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 KCNJ15Q99712 375 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ELAC1Q9H777 363 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 C14orf105Q9NVL8 296 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 BTNL2Q9UIR0 455 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ACAD8Q9UKU7 415 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 POMT2Q9UKY4 750 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 A0A1B0GTQ1 180 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 GPR171O14626 319 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 LANCL1O43813 399 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 BEST1O76090 585 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 ALPIP09923 528 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 H2AFB1P0C5Y9 115 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 H2AFB2P0C5Z0 115 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 SLC6A1P30531 599 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 GGT2P36268 569 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 XKP51811 444 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 TKTL1P51854 596 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 CTSCP53634 463 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 CASP6P55212 293 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 TNFRSF17Q02223 184 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 PUM1Q14671 1186 aaKnown RBP eCLIP10.21□□□□□ -0.77
CAPN3-203ENST00000349748 GRIN2CQ14957 1233 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 DUOXA2Q1HG44 320 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 INO80DQ53TQ3 878 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-203ENST00000349748 OTUD1Q5VV17 481 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-203ENST00000349748 TMEM91Q6ZNR0 172 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 SPATA22Q8NHS9 363 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 CA5BP1Q8WTZ4 195 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 OTUB1Q96FW1 271 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-203ENST00000349748 TMEM176AQ96HP8 235 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 DDOQ99489 341 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 GAL3ST1Q99999 423 aa10.21□□□□□ -0.77
CAPN3-203ENST00000349748 MRTO4Q9UKD2 239 aaKnown RBP10.21□□□□□ -0.77
CAPN3-203ENST00000349748 DPYSL4O14531 572 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 CD3EAPO15446 510 aaKnown RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 GADD45GO95257 159 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 IFNA4P05014 189 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 SCG5P05408 212 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 ENGP17813 658 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 S100PP25815 95 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 KCNJ5P48544 419 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 RBBP4Q09028 425 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 LRRC74AQ0VAA2 488 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 SEC23BQ15437 767 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 CHRNA6Q15825 494 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 TMIGD1Q6UXZ0 262 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 C2CD4AQ8NCU7 369 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 GTF3AQ92664 365 aaKnown RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 KIAA1143Q96AT1 154 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 ELMOD3Q96FG2 381 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 SCMH1Q96GD3 660 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 GAS2L1Q99501 681 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 TINF2Q9BSI4 451 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 ADAT1Q9BUB4 502 aaKnown RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 PRR14Q9BWN1 585 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 CHIAQ9BZP6 476 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 SIK2Q9H0K1 926 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 PTTG3PQ9NZH4 202 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 MYEF2Q9P2K5 600 aaKnown RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 TSPAN16Q9UKR8 245 aa10.21□□□□□ -0.78
CAPN3-203ENST00000349748 YARS2Q9Y2Z4 477 aaKnown RBP10.21□□□□□ -0.78
CAPN3-203ENST00000349748 DHFRP00374 187 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 VTNP04004 478 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PFKMP08237 780 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CXCL2P19875 107 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PVALBP20472 110 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 LCN1P31025 176 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 VIPR1P32241 457 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MAGEA2P43356 314 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 AVPR1BP47901 424 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 STARP49675 285 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CXCR3P49682 368 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SELENOPP49908 381 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ATP12AP54707 1039 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 BTG1P62324 171 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MC2RQ01718 297 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 OR4D1Q15615 310 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HECTD2Q5U5R9 776 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MLIPQ5VWP3 458 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SHFQ7M4L6 423 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MILR1Q7Z6M3 343 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MCATQ8IVS2 390 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ZDHHC1Q8WTX9 485 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CNOT9Q92600 299 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ESAMQ96AP7 390 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 FAM167AQ96KS9 214 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ANKRD19PQ9H560 264 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 METTL17Q9H7H0 456 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 EQTNQ9NQ60 294 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 GPN3Q9UHW5 284 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 STUB1Q9UNE7 303 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HYKKA2RU49 373 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 DGAT1O75907 488 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms