RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 UCHL1P09936 223 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 TYRP14679 529 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 ACTR1BP42025 376 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 CILP2Q8IUL8 1156 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 MMAAQ8IVH4 418 aaKnown RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 MED30Q96HR3 178 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 TSSK6Q9BXA6 273 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 WNT9AO14904 365 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 RAB3BP20337 219 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 CORO1AP31146 461 aaKnown RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 LAS2Q8IYD9 372 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 VGLL2Q8N8G2 317 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 TACR2P21452 398 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 ANKRD54Q6NXT1 300 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 ADGRA1Q86SQ6 560 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 PELOQ9BRX2 385 aaKnown RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 WDR18Q9BV38 432 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 TP73O15350 636 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 PIRTP0C851 137 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 RPS5P46782 204 aaKnown RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 LUMP51884 338 aaPredicted RBP12.85□□□□□ -0.35
COL6A3-202ENST00000347401 SOX10P56693 466 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 C14orf28Q4W4Y0 310 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 CLVS2Q5SYC1 327 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF783Q6ZMS7 281 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 FAM156AQ8NDB6 213 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 GSKIPQ9P0R6 139 aa12.85□□□□□ -0.35
COL6A3-202ENST00000347401 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 NPRL3Q12980 569 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 TUBG2Q9NRH3 451 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ABCB8Q9NUT2 735 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 FUOMA2VDF0 154 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PCLAFQ15004 111 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SLC22A15Q8IZD6 547 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 OR56A3Q8NH54 315 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PCDHB14Q9Y5E9 798 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 A0A0U1RQJ8 604 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ECI2O75521 394 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PRKACBP22694 351 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 TAS2R20P59543 309 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 CLEC12AQ5QGZ9 265 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF416Q9BWM5 594 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 IRF6O14896 467 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SLC16A5O15375 505 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SLC7A11Q9UPY5 501 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 GPR143P51810 404 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 GANABQ14697 944 aaKnown RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 TNFAIP8L2Q6P589 184 aaPredicted RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PROKR1Q8TCW9 393 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 DGAT2Q96PD7 388 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 CDHR4A6H8M9 788 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 SFT2D3Q587I9 215 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PRRT1Q99946 306 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 J3QLW9 94 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF19P17023 458 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 C3orf49Q96BT1 292 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 METTL2AQ96IZ6 378 aaKnown RBP12.84□□□□□ -0.35
COL6A3-202ENST00000347401 MYRFLQ96LU7 910 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 MGLLQ99685 303 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 ELOVL2Q9NXB9 296 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 DEC1Q9P2X7 70 aa12.84□□□□□ -0.35
COL6A3-202ENST00000347401 PIAS1O75925 651 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 CD3GP09693 182 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 RFC2P35250 354 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 MAN2A2P49641 1150 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 ACBD7Q8N6N7 88 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 TEX19Q8NA77 164 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 NMUR1Q9HB89 426 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 ZNF226Q9NYT6 803 aa12.83□□□□□ -0.35
COL6A3-202ENST00000347401 HYKKA2RU49 373 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 ACOT7O00154 380 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 EOMESO95936 686 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 RAP2BP61225 183 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 TAGLNQ01995 201 aaKnown RBP12.83□□□□□ -0.36
COL6A3-202ENST00000347401 PLEKHS1Q5SXH7 462 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 PARGQ86W56 976 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 ASB3Q9Y575 518 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 PRAMEF2O60811 474 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 FKBP1BP68106 108 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 ZNF460Q14592 562 aa12.83□□□□□ -0.36
COL6A3-202ENST00000347401 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms