RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 GABRR3A8MPY1 467 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 H3BMH7 237 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 NTN3O00634 580 aaPredicted RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 RFXANKO14593 260 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 PSMG1O95456 288 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 AK1P00568 194 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 PIM1P11309 404 aaPredicted RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 POLR2CP19387 275 aaPredicted RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 SLC7A1P30825 629 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 SSR2P43308 183 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 CSNK1EP49674 416 aaKnown RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 C2orf80Q0P641 193 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 CEACAM7Q14002 265 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 ZNF630Q2M218 657 aaPredicted RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 TIGD2Q4W5G0 525 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 SGO1Q5FBB7 561 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 TMEM31Q5JXX7 168 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 INTS11Q5TA45 600 aaKnown RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 FRMD1Q8N878 549 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 ACOT4Q8N9L9 421 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 ZFP90Q8TF47 636 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 TEX37Q96LM6 180 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 LRFN5Q96NI6 719 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 ALG2Q9H553 416 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 DENND2DQ9H6A0 471 aaPredicted RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 CMTM6Q9NX76 183 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 STOML1Q9UBI4 398 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 RAB23Q9ULC3 237 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 MRPS33Q9Y291 106 aaKnown RBP6.81□□□□□ -1.32
NUP43-201ENST00000340413 PCDHGA1Q9Y5H4 931 aa6.81□□□□□ -1.32
NUP43-201ENST00000340413 GSAPA4D1B5 854 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 PSMB5P28074 263 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 GRK6P43250 576 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 AVPR1BP47901 424 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 E2F1Q01094 437 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 PTGR1Q14914 329 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 HLA-BQ31612 363 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 PAGE3Q5JUK9 113 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SCIMPQ6UWF3 145 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 RIPOR1Q6ZS17 1223 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 MCATQ8IVS2 390 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 KIAA2013Q8IYS2 634 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 MICU2Q8IYU8 434 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 CSNK1A1LQ8N752 337 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 RASSF5Q8WWW0 418 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SLC35B4Q969S0 331 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 POLR2J2Q9GZM3 115 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 POLR2J3Q9H1A7 115 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 S100A14Q9HCY8 104 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KCMF1Q9P0J7 381 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 LRIT1Q9P2V4 623 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 LY6G6EA0A0G2JKS1 128 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 LOC100653049A0A140TA62 436 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 HYKKA2RU49 373 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 H0YGG7 62 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 NME4O00746 187 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 HNRNPRO43390 633 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 GMNNO75496 209 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KRT34O76011 436 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 TGFB1P01137 390 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 IFNA14P01570 189 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 ZNF806P0C7X5 589 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 NR2F6P10588 404 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 NELFEP18615 380 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 CDH3P22223 829 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 CD1CP29017 333 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 ARF3P61204 181 aaPredicted RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 NUMA1Q14980 2115 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 C1orf146Q5VVC0 180 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 DHFR2Q86XF0 187 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SLC35F3Q8IY50 421 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 OR9I1Q8NGQ6 314 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 PPP1R36Q96LQ0 422 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KCTD14Q9BQ13 255 aaPredicted RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 AICDAQ9GZX7 198 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 OR51B5Q9H339 312 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 MIEF1Q9NQG6 463 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 CALML5Q9NZT1 146 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 U3KQA8 63 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 DOCK9Q9BZ29 2069 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KNL1Q8NG31 2342 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 PDE9AO76083 593 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 KLK1P06870 262 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 IL3P08700 152 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 CSNK2A2P19784 350 aaPredicted RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 RORAP35398 523 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 MLLT3P42568 568 aaPredicted RBP6.8□□□□□ -1.32
NUP43-201ENST00000340413 GSK3BP49841 420 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SLC7A2P52569 658 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 LIMK1P53667 647 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 TAS2R50P59544 299 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SERTAD2Q14140 314 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 C6orf10Q5SRN2 563 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 ARHGAP22Q7Z5H3 698 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 SPNS2Q8IVW8 549 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 MSRB3Q8IXL7 192 aa6.8□□□□□ -1.32
NUP43-201ENST00000340413 VPS33AQ96AX1 596 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms