RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 RTL4Q6ZR62 310 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 TCAIMQ8N3R3 496 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 OR14A16Q8NHC5 309 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 MS4A6EQ96DS6 147 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 CFAP36Q96G28 342 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 SMC6Q96SB8 1091 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 REXO4Q9GZR2 422 aaKnown RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 LDAHQ9H6V9 325 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 GPRC5BQ9NZH0 403 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 OARD1Q9Y530 152 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 HIVEP1P15822 2718 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 FAM166BA8MTA8 275 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 WWP2O00308 870 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 CDC7O00311 574 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 DYRK3O43781 588 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 P04436 131 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-202ENST00000338995 PEX19P40855 299 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 ELK3P41970 407 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 NUP107P57740 925 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 TBL3Q12788 808 aaKnown RBP13.2□□□□□ -0.3
COMMD4-202ENST00000338995 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 B3GNT6Q6ZMB0 384 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 GOLM1Q8NBJ4 401 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-202ENST00000338995 OR2L5Q8NG80 312 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 OR8K3Q8NH51 312 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 SARAFQ96BY9 339 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 EXO5Q9H790 373 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 ZDHHC11Q9H8X9 412 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 IL1RL2Q9HB29 575 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-202ENST00000338995 SACM1LQ9NTJ5 587 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 NSMCE4AQ9NXX6 385 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 VTI1BQ9UEU0 232 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 TACC2O95359 2948 aa13.2□□□□□ -0.3
COMMD4-202ENST00000338995 SPG11Q96JI7 2443 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 A0A0G2JN53 185 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 KLK8O60259 260 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 SUSD5O60279 629 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 WDR1O75083 606 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 BANF1O75531 89 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 OR6B1O95007 311 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 COX7A2P14406 83 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 MAN2A2P49641 1150 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 ARL4CP56559 192 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 FOLH1Q04609 750 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 TFF3Q07654 80 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 MGAT5Q09328 741 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 BIKQ13323 160 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 LAPTM5Q13571 262 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 FRG1Q14331 258 aaKnown RBP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 SLBPQ14493 270 aaKnown RBP eCLIP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 ZNF750Q32MQ0 723 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 KRTAP21-3Q3LHN1 58 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 XKR6Q5GH73 641 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 EMC4Q5J8M3 183 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 PAGE2BQ5JRK9 111 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 FAM47EQ6ZV65 393 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 FAM47BQ8NA70 645 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 OR5M9Q8NGP3 310 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 TTYH2Q9BSA4 534 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 TTTY12Q9BZ98 90 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 EHD1Q9H4M9 534 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 PNPLA3Q9NST1 481 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 DEPPQ9NTK1 212 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 ALKBH4Q9NXW9 302 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 ZNF223Q9UK11 482 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-202ENST00000338995 DAPP1Q9UN19 280 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
COMMD4-202ENST00000338995 A0A1B0GVC2 190 aa13.18□□□□□ -0.3
COMMD4-202ENST00000338995 FAM95CA0A1B0GW59 222 aa13.18□□□□□ -0.3
COMMD4-202ENST00000338995 NPEPPSL1A6NEC2 478 aa13.18□□□□□ -0.3
COMMD4-202ENST00000338995 CES2O00748 559 aa13.18□□□□□ -0.3
COMMD4-202ENST00000338995 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms