RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 KCTD4Q8WVF5 259 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 LRRC1Q9BTT6 524 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 CAPS2Q9BXY5 557 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 ALOXE3Q9BYJ1 711 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 DAPP1Q9UN19 280 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 MMACHCQ9Y4U1 282 aa12.46□□□□□ -0.41
NUDCD3-201ENST00000338427 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 SUPT3HB4E1H0 165 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 WWP2O00308 870 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 NME2P1O60361 137 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 CTNSO60931 367 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 SUPT3HO75486 399 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ITGA10O75578 1167 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PDE9AO76083 593 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 IFNA16P05015 189 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PCNAP12004 261 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 NME2P22392 152 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 TRHRP34981 398 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 MEOX1P50221 254 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 CLCN2P51788 898 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 MTTPP55157 894 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ETF1P62495 437 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 SLMAPQ14BN4 828 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF750Q32MQ0 723 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 KRTCAP3Q53RY4 240 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 MROH9Q5TGP6 573 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 DOLPP1Q86YN1 238 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 TCAIMQ8N3R3 496 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PDPRQ8NCN5 879 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF473Q8WTR7 871 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PTPMT1Q8WUK0 201 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 UCN3Q969E3 161 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 WDR34Q96EX3 536 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PTCD3Q96EY7 689 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ATOH8Q96SQ7 321 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 PRM3Q9NNZ6 103 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 ENTPD4Q9Y227 616 aa12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 UTP11Q9Y3A2 253 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-201ENST00000338427 EML6Q6ZMW3 1958 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 G3V3Y1 287 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 CLDN4O14493 209 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 PEX1O43933 1283 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 S100BP04271 92 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 C2P06681 752 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 MTHFD2P13995 350 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 TNNI3P19429 210 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 HTR1EP28566 365 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 HSD17B7P56937 341 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 RBPJQ06330 500 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 ART3Q13508 389 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 CDKL4Q5MAI5 379 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 FAM219BQ5XKK7 198 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 TRIM40Q6P9F5 258 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 IL20RBQ6UXL0 311 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 CENPLQ8N0S6 344 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 LGI4Q8N135 537 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 TMEM156Q8N614 296 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 TEX9Q8N6V9 391 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 HORMAD2Q8N7B1 307 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 ACOT4Q8N9L9 421 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 TTLQ8NG68 377 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 ANKRD9Q96BM1 317 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 PPWD1Q96BP3 646 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 MS4A8Q9BY19 250 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 DEFB127Q9H1M4 99 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 EHD1Q9H4M9 534 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 NMRAL1Q9HBL8 299 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 DEPPQ9NTK1 212 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 SUCOQ9UBS9 1254 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 LRBAP50851 2863 aa12.44□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A0G2JMM0 328 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A1B0GTH9 108 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A1W2PPB8 328 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 A0A1W2PRS3 328 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 KIR3DP1A8MWS1 328 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ADAM10O14672 748 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 HNRNPRO43390 633 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 HS6ST1O60243 411 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 PRKRAO75569 313 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 OR2J2O76002 312 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ZFAND5O76080 213 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 OR6B1O95007 311 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ETHE1O95571 254 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 GSTA2P09210 222 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms