RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MMGT1Q8N4V1 131 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 MNS1Q8NEH6 495 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 OR9A4Q8NGU2 314 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 RHEBL1Q8TAI7 183 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 M1APQ8TC57 530 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 FBXO25Q8TCJ0 367 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 METTL21AQ8WXB1 218 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 NEIL2Q969S2 332 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 SMIM10Q96HG1 83 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 THOC3Q96J01 351 aaKnown RBP5.97□□□□□ -1.45
SMG1-201ENST00000330588 IMMP1LQ96LU5 166 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 NPLQ9BXD5 320 aaPredicted RBP5.97□□□□□ -1.45
SMG1-201ENST00000330588 VN1R1Q9GZP7 353 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 ILKAPQ9H0C8 392 aaPredicted RBP5.97□□□□□ -1.45
SMG1-201ENST00000330588 DPH5Q9H2P9 285 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 SMYD2Q9NRG4 433 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 TEKT2Q9UIF3 430 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 PTBP2Q9UKA9 531 aaKnown RBP5.97□□□□□ -1.45
SMG1-201ENST00000330588 SH2B3Q9UQQ2 575 aa5.97□□□□□ -1.45
SMG1-201ENST00000330588 MED13Q9UHV7 2174 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 CCDC88CQ9P219 2028 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 hCG_2014768A0A024R1R8 64 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 A0A087X1B8 175 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 A0A088AWK7 358 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 TRAV17A0A0B4J275 112 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 DYTNA2CJ06 578 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 BLACEA4D250 179 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 NPEPPSL1A6NEC2 478 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 A6NL46 340 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 CDC7O00311 574 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 OR1F1O43749 312 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 LCMT2O60294 686 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 H2AFYO75367 372 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 CLEC3AO75596 197 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 KLHL18O94889 574 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 DDAH2O95865 285 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 F7P08709 466 aaPredicted RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 C1GALT1C1LP0DN25 315 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 ZNF10P21506 573 aaPredicted RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 PAX7P23759 505 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 SSTR1P30872 391 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 PHBP35232 272 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 MAGEA4P43358 317 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 XCR1P46094 333 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 RHAGQ02094 409 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 C2orf54Q08AI8 447 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 Q0VFX4 171 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 CDC16Q13042 620 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 USP10Q14694 798 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 ZNF169Q14929 603 aaPredicted RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 TSNQ15631 228 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 ADPRMQ3LIE5 342 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 PLEKHN1Q494U1 663 aaPredicted RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 C8orf74Q6P047 294 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 LRRC70Q7Z2Q7 622 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 CPEB2Q7Z5Q1 589 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 ST6GALNAC3Q8NDV1 305 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 ZNF740Q8NDX6 193 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 OR51Q1Q8NH59 317 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 ANKRD49Q8WVL7 239 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 PSMF1Q92530 271 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 PTCD3Q96EY7 689 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 CYTH2Q99418 400 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 EFCAB11Q9BUY7 163 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 NMRAL1Q9HBL8 299 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 MMP25Q9NPA2 562 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 AGPAT4Q9NRZ5 378 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 LANCL2Q9NS86 450 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 ZDHHC18Q9NUE0 388 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 DNAJC11Q9NVH1 559 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 NUDT4Q9NZJ9 180 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 SLC17A6Q9P2U8 582 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 IKZF3Q9UKT9 509 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 TMCO1Q9UM00 188 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 PLAAQ9Y263 795 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 MTO1Q9Y2Z2 717 aaKnown RBP5.96□□□□□ -1.46
SMG1-201ENST00000330588 MMACHCQ9Y4U1 282 aa5.96□□□□□ -1.46
SMG1-201ENST00000330588 CELSR3Q9NYQ7 3312 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 IGKV3D-11A0A0A0MRZ8 115 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 FEZF1A0PJY2 475 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 SYCE1LA8MT33 242 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 CXorf49A8MYA2 514 aaPredicted RBP5.95□□□□□ -1.46
SMG1-201ENST00000330588 NDUFS4O43181 175 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 UGDHO60701 494 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 KERAO60938 352 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 WDR47O94967 919 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 GUCA1CO95843 209 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 FHP07954 510 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 LTA4HP09960 611 aaKnown RBP5.95□□□□□ -1.46
SMG1-201ENST00000330588 CCDC166P0CW27 439 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 RNH1P13489 461 aaKnown RBP5.95□□□□□ -1.46
SMG1-201ENST00000330588 CD1DP15813 335 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 NAT1P18440 290 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 IL1RNP18510 177 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 CFPP27918 469 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 GDNFP39905 211 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 PLTPP55058 493 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 MLLT10P55197 1068 aa5.95□□□□□ -1.46
SMG1-201ENST00000330588 TGM3Q08188 693 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms