RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PCBP4P57723 403 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 KCNJ10P78508 379 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SMAD4Q13485 552 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SCARB2Q14108 478 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 HIPK1Q86Z02 1210 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 OR13H1Q8NG92 308 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 NFKBIDQ8NI38 313 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 TBC1D20Q96BZ9 403 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 MS4A6EQ96DS6 147 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 RDH12Q96NR8 316 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 MUS81Q96NY9 551 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 BARD1Q99728 777 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SARGQ9BW04 601 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 TMEM38AQ9H6F2 299 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 ADPRHL2Q9NX46 363 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SNX11Q9Y5W9 270 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 LRP4O75096 1905 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 F3P13726 295 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 GSTM5P46439 218 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 EEF1A2Q05639 463 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 RBBP4Q09028 425 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 ADPRMQ3LIE5 342 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 IQCCQ4KMZ1 466 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SHQ1Q6PI26 577 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 CEP68Q76N32 757 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 NATD1Q8N6N6 113 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 FRMD1Q8N878 549 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 C7orf34Q96L11 122 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 MBOAT4Q96T53 435 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 PHF7Q9BWX1 381 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 NLNQ9BYT8 704 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SRMSQ9H3Y6 488 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 LTB4R2Q9NPC1 389 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 TRNAU1APQ9NX07 287 aaKnown RBP17.46■□□□□ 0.39
CCDC43-201ENST00000315286 BAG5Q9UL15 447 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 SNX7Q9UNH6 387 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 CYP8B1Q9UNU6 501 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 PCDHGA4Q9Y5G9 962 aa17.46■□□□□ 0.39
CCDC43-201ENST00000315286 GON4LQ3T8J9 2241 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 SMIM31A0A1B0GVY4 71 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 WASHC1A8K0Z3 465 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 ERI3O43414 337 aaKnown RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 HS6ST1O60243 411 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 FRKP42685 505 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 NR1H2P55055 460 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 TRA2BP62995 288 aaKnown RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 BIRC2Q13490 618 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 KCTD21Q4G0X4 260 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 PIWIL3Q7Z3Z3 882 aaKnown RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 ZC3H7AQ8IWR0 971 aaKnown RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 SLC22A18ASQ8N1D0 253 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 TOE1Q96GM8 510 aaKnown RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 MSANTD3Q96H12 275 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 DOHHQ9BU89 302 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 AMBRA1Q9C0C7 1298 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 PRO3102Q9H379 93 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 RAD21L1Q9H4I0 556 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 POLMQ9NP87 494 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 PRDM7Q9NQW5 492 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 FAM118AQ9NWS6 357 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 C2orf42Q9NWW7 574 aa17.45■□□□□ 0.38
CCDC43-201ENST00000315286 IFT80Q9P2H3 777 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-201ENST00000315286 MYO1GB0I1T2 1018 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 OPN1SWP03999 348 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 SELENOWP63302 87 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 CDK6Q00534 326 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 HSPB3Q12988 150 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 PRRT3Q5FWE3 981 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TOR1AIP1Q5JTV8 583 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 NDUFAF5Q5TEU4 345 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 ABHD17CQ6PCB6 329 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 ABI3BPQ7Z7G0 1075 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TBC1D19Q8N5T2 526 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 ARL10Q8N8L6 244 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 MFSD9Q8NBP5 474 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 OR8K5Q8NH50 307 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 EPB41L1Q9H4G0 881 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TMEFF2Q9UIK5 374 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TRIOBPQ9H2D6 2365 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 PRAMEF26H0Y7S4 382 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 IGLV3-19P01714 112 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 GSTM2P28161 218 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 PIGAP37287 484 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 SLAMF1Q13291 335 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 CCDC85BQ15834 202 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 CNPY1Q3B7I2 92 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TMEM26Q6ZUK4 368 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 DCP2Q8IU60 420 aaKnown RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TAMM41Q96BW9 452 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 ZNF764Q96H86 408 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TCEAL2Q9H3H9 227 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 SIRT3Q9NTG7 399 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-201ENST00000315286 TAS2R7Q9NYW3 318 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 NDUFA13Q9P0J0 144 aa17.44■□□□□ 0.38
CCDC43-201ENST00000315286 M0QX08 132 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 PRKRAO75569 313 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 CHRNB1P11230 501 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms