RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 CLDN7O95471 211 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 PTTG1O95997 202 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 FGL1Q08830 312 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 NFATC3Q12968 1075 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 SGCBQ16585 318 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 KLK6Q92876 244 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 SAV1Q9H4B6 383 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 RABL2AQ9UBK7 228 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 RABL2BQ9UNT1 228 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 BTBD19C9JJ37 291 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 CHMP24386 653 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 GSTM2P28161 218 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 RFC2P35250 354 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 ADH7P40394 386 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 MLLT10P55197 1068 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 MLLT1Q03111 559 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 ZNF767PQ75MW2 155 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 OR4K1Q8NGD4 311 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 RAB8BQ92930 207 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 TTTY10Q9BZA0 68 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 EIF5A2Q9GZV4 153 aaKnown RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 REEP4Q9H6H4 257 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 CARS2Q9HA77 564 aaKnown RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 WRAP73Q9P2S5 460 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-201ENST00000312413 WASF3Q9UPY6 502 aa13.2□□□□□ -0.3
CLCN6-201ENST00000312413 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 H7C417 338 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 AHSA1O95433 338 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 CTSOP43234 321 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 DECR1Q16698 335 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 PQLC3Q8N755 202 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 SCGB1C1Q8TD33 95 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 HCAR2Q8TDS4 363 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 SECISBP2Q96T21 854 aaKnown RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 PIP5K1AQ99755 562 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 FAM118AQ9NWS6 357 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 IL36AQ9UHA7 158 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 BCL9LQ86UU0 1499 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 DUSP11O75319 330 aaKnown RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 MRPL3P09001 348 aaKnown RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ACTC1P68032 377 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ACTA1P68133 377 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 GNMTQ14749 295 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 CMPK2Q5EBM0 449 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 TFGQ92734 400 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 DPYSL5Q9BPU6 564 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 SMOXQ9NWM0 555 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 HSPE1-MOB4S4R3N1 261 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 STSP08842 583 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 UQCRC2P22695 453 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 HK3P52790 923 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 NPRL3Q12980 569 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 CEP68Q76N32 757 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 SLC29A4Q7RTT9 530 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 BEST3Q8N1M1 668 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 A8MUA0 341 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 S1PR1P21453 382 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 EXOC3L2Q2M3D2 409 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 GTF2IRD2BQ6EKJ0 949 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 GTF2IRD2Q86UP8 949 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 MINDY1Q8N5J2 469 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 PEX13Q92968 403 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ORAI3Q9BRQ5 295 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 STUB1Q9UNE7 303 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 ZNF30P17039 623 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 VIPR1P32241 457 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 KDELR2P33947 212 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 SERINC3Q13530 473 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 KCNC3Q14003 757 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 JPH3Q8WXH2 748 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 RBP7Q96R05 134 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 KATNBL1Q9H079 304 aa13.19□□□□□ -0.3
CLCN6-201ENST00000312413 RPH3AQ9Y2J0 694 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-201ENST00000312413 HYKKA2RU49 373 aa13.18□□□□□ -0.3
CLCN6-201ENST00000312413 B8ZZF3 427 aa13.18□□□□□ -0.3
CLCN6-201ENST00000312413 SLC1A7O00341 560 aa13.18□□□□□ -0.3
CLCN6-201ENST00000312413 C8AP07357 584 aa13.18□□□□□ -0.3
CLCN6-201ENST00000312413 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
CLCN6-201ENST00000312413 ADH6P28332 368 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms