RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 NXPE4Q6UWF7 544 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SCD5Q86SK9 330 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SLC15A3Q8IY34 581 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 MMABQ96EY8 250 aaPredicted RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 TM9SF2Q99805 663 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 OR51I1Q9H343 314 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 MOV10Q9HCE1 1003 aaKnown RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 AASSQ9UDR5 926 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 ZNF860A6NHJ4 632 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 CTSAP10619 480 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 PUDPQ08623 228 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 IQCF2Q8IXL9 164 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 IGLON5A6NGN9 336 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 AXIN1O15169 862 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 ZNF432O94892 652 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 CDRT1O95170 752 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 TPTEP56180 551 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 ALG1LQ6GMV1 187 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 TOMM5Q8N4H5 51 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 OR52B6Q8NGF0 335 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 THEM6Q8WUY1 208 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 B3GAT2Q9NPZ5 323 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PCDHGB5Q9Y5G0 923 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 DNAJC15Q9Y5T4 150 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 FAM221BA6H8Z2 402 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 EIF3FO00303 357 aaPredicted RBP15.31■□□□□ 0.04
USP42-201ENST00000306177 FAAHO00519 579 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 EMC8O43402 210 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PEPDP12955 493 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 BMPR1AP36894 532 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PLGLB1Q02325 96 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 SLAMF1Q13291 335 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 FANK1Q8TC84 345 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PNPLA2Q96AD5 504 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 IL17FQ96PD4 163 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 TXLNGYQ9BZA5 131 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 GPRC5BQ9NZH0 403 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 SEC14L4Q9UDX3 406 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 LIPT1Q9Y234 373 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 EDIL3O43854 480 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 RASAL1O95294 804 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 C7P10643 843 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 F8A1P23610 371 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 KDELR2P33947 212 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 ZNF41P51814 821 aaPredicted RBP15.31■□□□□ 0.04
USP42-201ENST00000306177 ARFRP1Q13795 201 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 COQ5Q5HYK3 327 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 ISCA2Q86U28 154 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 NUP43Q8NFH3 380 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 OR5M3Q8NGP4 307 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 C12orf43Q96C57 262 aaKnown RBP15.31■□□□□ 0.04
USP42-201ENST00000306177 PIP5K1AQ99755 562 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 G6PC3Q9BUM1 346 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 GNG8Q9UK08 70 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PCDHB14Q9Y5E9 798 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PEX12O00623 359 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PFKLP17858 780 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 CLDN8P56748 225 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 GALNT1Q10472 559 aaPredicted RBP15.31■□□□□ 0.04
USP42-201ENST00000306177 RUNX3Q13761 415 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 WSCD2Q2TBF2 565 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 PDSS1Q5T2R2 415 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 FBXO46Q6PJ61 603 aaPredicted RBP15.31■□□□□ 0.04
USP42-201ENST00000306177 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
USP42-201ENST00000306177 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CLIC3O95833 236 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 S100A9P06702 114 aaKnown RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 FHP07954 510 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 KCNAB2Q13303 367 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ASB18Q6ZVZ8 466 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ZSWIM9Q86XI8 627 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 C3orf58Q8NDZ4 430 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CCDC107Q8WV48 283 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 FUBP1Q96AE4 644 aaKnown RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 MUS81Q96NY9 551 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 PTGES2Q9H7Z7 377 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ZNF639Q9UID6 485 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 RBMX2Q9Y388 322 aaKnown RBP15.3■□□□□ 0.04
USP42-201ENST00000306177 MT-ND5P03915 603 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 GINS1Q14691 196 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 FAM189A2Q15884 450 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CYP27C1Q4G0S4 372 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CRTC1Q6UUV9 634 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CITED4Q96RK1 184 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 DPH7Q9BTV6 452 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 OR14I1A6ND48 311 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CEACAM7Q14002 265 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 CST6Q15828 149 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 ZNF404Q494X3 552 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 TSPAN33Q86UF1 283 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 AMIGO1Q86WK6 493 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 TMEM17Q86X19 198 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 TMEM25Q86YD3 366 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 HUS1BQ8NHY5 278 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 F2RL3Q96RI0 385 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 IL21RQ9HBE5 538 aa15.3■□□□□ 0.04
USP42-201ENST00000306177 NPC1O15118 1278 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms