RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 BTBD16Q32M84 506 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 FCRLBQ6BAA4 426 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 OR4C11Q6IEV9 310 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 PAPD4Q6PIY7 484 aaKnown RBP17.1■□□□□ 0.33
SPSB3-201ENST00000301717 QSOX2Q6ZRP7 698 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 RIBC1Q8N443 379 aaPredicted RBP17.1■□□□□ 0.33
SPSB3-201ENST00000301717 ARMC2Q8NEN0 867 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 REPS1Q96D71 796 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 L3HYPDHQ96EM0 354 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 TBCDQ9BTW9 1192 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 NPLQ9BXD5 320 aaPredicted RBP17.1■□□□□ 0.33
SPSB3-201ENST00000301717 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 C19orf25Q9UFG5 118 aaPredicted RBP17.1■□□□□ 0.33
SPSB3-201ENST00000301717 G3BP2Q9UN86 482 aaKnown RBP17.1■□□□□ 0.33
SPSB3-201ENST00000301717 TSC22D4Q9Y3Q8 395 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 CLDN16Q9Y5I7 305 aa17.1■□□□□ 0.33
SPSB3-201ENST00000301717 A0A088AWK7 358 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 UBFD1O14562 309 aaKnown RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 F10P00742 488 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 PDYNP01213 254 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 SERPINA7P05543 415 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 PLA2G2AP14555 144 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 ZNF10P21506 573 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 PTX3P26022 381 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 HPDP32754 393 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 KRT71Q3SY84 523 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 GGTA1PQ4G0N0 100 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 GPRIN3Q6ZVF9 776 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 SCUBE1Q8IWY4 988 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 BANPQ8N9N5 519 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 UCN3Q969E3 161 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 RGMAQ96B86 450 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 APOPT1Q96IL0 206 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 VPS50Q96JG6 964 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 TUBB6Q9BUF5 446 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 MRPL1Q9BYD6 325 aaKnown RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 ROPN1BQ9BZX4 212 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 ELOVL6Q9H5J4 265 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 ROPN1Q9HAT0 212 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 CLK4Q9HAZ1 481 aaKnown RBP17.09■□□□□ 0.33
SPSB3-201ENST00000301717 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 PRDM9Q9NQV7 894 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 PRTFDC1Q9NRG1 225 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 ADGRE2Q9UHX3 823 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 NBASA2RRP1 2371 aa17.09■□□□□ 0.33
SPSB3-201ENST00000301717 TCRBV16S1A1N1A0A5B0 115 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 WASHC1A8K0Z3 465 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 TMPRSS11DO60235 418 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 LDB3O75112 727 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SCELO95171 688 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 CPA3P15088 417 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 CHN1P15882 459 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 BSGP35613 385 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 NAGLUP54802 743 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 MLLT10P55197 1068 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 FOXA1P55317 472 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.32
SPSB3-201ENST00000301717 PHEXP78562 749 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
SPSB3-201ENST00000301717 IFT88Q13099 833 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SLC13A2Q13183 592 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SLAMF1Q13291 335 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 PCLAFQ15004 111 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 CCDC153Q494R4 210 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SLC6A19Q695T7 634 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 C10orf107Q8IVU9 208 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 EFCAB3Q8N7B9 438 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SRFBP1Q8NEF9 429 aaKnown RBP17.08■□□□□ 0.32
SPSB3-201ENST00000301717 SREK1Q8WXA9 508 aaKnown RBP17.08■□□□□ 0.32
SPSB3-201ENST00000301717 AGAP4Q96P64 663 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 FAM111AQ96PZ2 611 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 ZNF382Q96SR6 550 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 MECRQ9BV79 373 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 PLA2G3Q9NZ20 509 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 TRPS1Q9UHF7 1281 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 ATG4BQ9Y4P1 393 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 TIMM22Q9Y584 194 aa17.08■□□□□ 0.32
SPSB3-201ENST00000301717 A8MUI8 341 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 FOXE1O00358 373 aaPredicted RBP17.07■□□□□ 0.32
SPSB3-201ENST00000301717 MAN1A2O60476 641 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 CYC1P08574 325 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 PRR30Q53SZ7 412 aaPredicted RBP17.07■□□□□ 0.32
SPSB3-201ENST00000301717 IRAK1BP1Q5VVH5 260 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 OR4N5Q8IXE1 308 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 Q8NA96 180 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 SELENOMQ8WWX9 145 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 ZIM3Q96PE6 472 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 ROGDIQ9GZN7 287 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 PNO1Q9NRX1 252 aaKnown RBP17.07■□□□□ 0.32
SPSB3-201ENST00000301717 PLLPQ9Y342 182 aa17.07■□□□□ 0.32
SPSB3-201ENST00000301717 PRRC2CQ9Y520 2896 aaKnown RBP17.07■□□□□ 0.32
SPSB3-201ENST00000301717 CNTRLQ7Z7A1 2325 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms