RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 RAB42Q8N4Z0 105 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 FBXL6Q8N531 539 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 ATG16L2Q8NAA4 619 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 TMEM145Q8NBT3 493 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 OR52J3Q8NH60 311 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 CCL4L1Q8NHW4 92 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 TEFMQ96QE5 360 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 NAA50Q9GZZ1 169 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 CXorf21Q9HAI6 301 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 PRAMEF25A6NGN4 478 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 PTGES3LE9PB15 166 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 TMX2-CTNND1H3BSU7 103 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 TRMUO75648 421 aaKnown RBP18.36■□□□□ 0.53
BRAF-201ENST00000288602 TEAD1P28347 426 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 CDK6Q00534 326 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 HTR4Q13639 388 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 RPE65Q16518 533 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 UAP1L1Q3KQV9 507 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 GPR107Q5VW38 600 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 TNFAIP8L2Q6P589 184 aaPredicted RBP18.36■□□□□ 0.53
BRAF-201ENST00000288602 TRIM40Q6P9F5 258 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 ENPP7Q6UWV6 458 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 SLC44A2Q8IWA5 706 aaPredicted RBP18.36■□□□□ 0.53
BRAF-201ENST00000288602 ISOC1Q96CN7 298 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 YTHDF1Q9BYJ9 559 aaKnown RBP18.36■□□□□ 0.53
BRAF-201ENST00000288602 KIF17Q9P2E2 1029 aa18.36■□□□□ 0.53
BRAF-201ENST00000288602 GLOD5A6NK44 160 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 SEMA3DO95025 777 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 HOXB6P17509 224 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 FUT4P22083 530 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 PKLRP30613 574 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 ACSL1P33121 698 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 BCL6P41182 706 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 CLK3P49761 638 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 PAGE2Q7Z2X7 111 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 BPIFB6Q8NFQ5 453 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 CREB3L4Q8TEY5 395 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 RGMAQ96B86 450 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 GABARAPL1Q9H0R8 117 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 SYNPO2LQ9H987 977 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 FANCEQ9HB96 536 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 SLC6A20Q9NP91 592 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 MRPS30Q9NP92 439 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 NDUFAF4Q9P032 175 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 TBC1D29Q9UFV1 150 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 PRSS38A1L453 326 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 C4orf51C9J302 202 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 J3KTA2 159 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 SLC16A6O15403 523 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 XPNPEP2O43895 674 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 PEBP1P30086 187 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 LTBRP36941 435 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 RPS26P11Q5JNZ5 115 aaPredicted RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 ZNF773Q6PK81 442 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 ZNF793Q6ZN11 406 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 PIWIL3Q7Z3Z3 882 aaKnown RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 NUDT13Q86X67 352 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 TSACCQ96A04 125 aaPredicted RBP18.35■□□□□ 0.53
BRAF-201ENST00000288602 TBC1D20Q96BZ9 403 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 NLNQ9BYT8 704 aa18.35■□□□□ 0.53
BRAF-201ENST00000288602 PRR19A6NJB7 356 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 HAT1O14929 419 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 PDPK1O15530 556 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 HTR1AP08908 422 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 EEF1A2Q05639 463 aaKnown RBP18.34■□□□□ 0.53
BRAF-201ENST00000288602 HEPACAMQ14CZ8 416 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 CEACAM20Q6UY09 585 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 OR2L8Q8NGY9 312 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 HDAC2Q92769 488 aaKnown RBP18.34■□□□□ 0.53
BRAF-201ENST00000288602 RAB8BQ92930 207 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 FAM131CQ96AQ9 280 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 C1QTNF7Q9BXJ2 289 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 RAB23Q9ULC3 237 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 SH3GLB1Q9Y371 365 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 PIAS3Q9Y6X2 628 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 A0A1B0GVG6 124 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 LRIT2A6NDA9 550 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 B4GALT2O60909 372 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 UQCRC2P22695 453 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 SSR2P43308 183 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 FADDQ13158 208 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 OR4C11Q6IEV9 310 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 MTSS1LQ765P7 747 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 HORMAD2Q8N7B1 307 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 OR4E2Q8NGC2 313 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 OR1E3Q8WZA6 343 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 UBE2FQ969M7 185 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 C12orf43Q96C57 262 aaKnown RBP18.34■□□□□ 0.53
BRAF-201ENST00000288602 MRGPRX1Q96LB2 322 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 DPH7Q9BTV6 452 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 TMEM38AQ9H6F2 299 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 KRT84Q9NSB2 600 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 PAK1IP1Q9NWT1 392 aaPredicted RBP18.34■□□□□ 0.53
BRAF-201ENST00000288602 PADI2Q9Y2J8 665 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 MDC1Q14676 2089 aaKnown RBP18.34■□□□□ 0.53
BRAF-201ENST00000288602 NINQ8N4C6 2090 aa18.34■□□□□ 0.53
BRAF-201ENST00000288602 FMO3P31513 532 aa18.33■□□□□ 0.53
BRAF-201ENST00000288602 GSSP48637 474 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms