RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SLC1A4P43007 532 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PTGFRP43088 359 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PSG6Q00889 435 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SHBQ15464 509 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SHROOM1Q2M3G4 852 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 SMTNL2Q2TAL5 461 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 LCN1P1Q5VSP4 162 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SYVN1Q86TM6 617 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 NOXA1Q86UR1 476 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 STHQ8IWL8 128 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 EFCAB13Q8IY85 973 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TMEM199Q8N511 208 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 RDM1Q8NG50 284 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SSMEM1Q8WWF3 244 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TMEM37Q8WXS4 190 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ZBED3Q96IU2 234 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 GPA33Q99795 319 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 FAM110AQ9BQ89 295 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SLITRK2Q9H156 845 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 UPF2Q9HAU5 1272 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 Q9N2J8 555 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 AKIP1Q9NQ31 210 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PANK4Q9NVE7 773 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 EMC3Q9P0I2 261 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 MRTO4Q9UKD2 239 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 ERVK-19Q9WJR5 959 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 HKR1P10072 659 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 B4GALT1P15291 398 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PTBP1P26599 531 aaKnown RBP eCLIP2.6□□□□□ -1.99
CHD1-201ENST00000284049 ARRB2P32121 409 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SPAM1P38567 509 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 RFX3P48380 749 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SLC7A2P52569 658 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 MFAP3P55082 362 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ABCE1P61221 599 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 YWHAGP61981 247 aaKnown RBP eCLIP2.6□□□□□ -1.99
CHD1-201ENST00000284049 IFFO1Q0D2I5 559 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 MERTKQ12866 999 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 DECR1Q16698 335 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 CA9Q16790 459 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PTPN20Q4JDL3 420 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 BEND6Q5SZJ8 279 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 NDUFAF5Q5TEU4 345 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 CLEC2AQ6UVW9 174 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SPATA6LQ8N4H0 392 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TANKQ92844 425 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 BCL7BQ9BQE9 202 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SLC2A11Q9BYW1 496 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 VCX3BQ9H321 246 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SEBOXQ9HB31 216 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 ZNF160Q9HCG1 818 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ZNHIT2Q9UHR6 403 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PITPNC1Q9UKF7 332 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 NPTNQ9Y639 398 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 A0A1B0GUL6 1792 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 WDR17Q8IZU2 1322 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TEX51A0A1B0GUA7 166 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TMEM129A0AVI4 362 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SLC28A1O00337 649 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SLC30A4O14863 429 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 GPR137BO60478 399 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SMIM18P0DKX4 95 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 UNGP13051 313 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 TAS2R38P59533 333 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 HNF4GQ14541 408 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TGFBIQ15582 683 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 STXBP2Q15833 593 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 EPHA10Q5JZY3 1008 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 C6orf183Q5T699 404 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 FRG2Q64ET8 278 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 TPGS2Q68CL5 300 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ZNF474Q6S9Z5 364 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 LINC00114Q6XXX2 140 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 BCDIN3DQ7Z5W3 292 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 PLCZ1Q86YW0 608 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 CHERPQ8IWX8 916 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 LINC00482Q8N8I6 264 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 OR4N2Q8NGD1 307 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PLEKHA4Q9H4M7 779 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ZNF552Q9H707 407 aaPredicted RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 CDH20Q9HBT6 801 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 FAM120CQ9NX05 1096 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 GCNT4Q9P109 453 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 UTS2RQ9UKP6 389 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 GABRQQ9UN88 632 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 RPH3ALQ9UNE2 315 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 CTNND2Q9UQB3 1225 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 STON1Q9Y6Q2 735 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 SCO2A0A1W2PP80 73 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 ACOD1A6NK06 481 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 WASH3PC4AMC7 463 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 PRSS46E5RG02 174 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 F8VVB4 439 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 F8VWA3 439 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 K7ERQ8 282 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 HRKO00198 91 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 BUD23O43709 281 aaKnown RBP2.6□□□□□ -1.99
CHD1-201ENST00000284049 FCGR3BO75015 233 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 GLRA3O75311 464 aa2.6□□□□□ -1.99
CHD1-201ENST00000284049 NME6O75414 186 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms