RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MTSS1LQ765P7 747 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 CHCHD4Q8N4Q1 142 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 DPH2Q9BQC3 489 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 CXXC1Q9P0U4 656 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 TRPS1Q9UHF7 1281 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 ISM1B1AKI9 464 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 TLX2O43763 284 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 GKP32189 559 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 SLC9A3P48764 834 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 ADPRMQ3LIE5 342 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 LIPKQ5VXJ0 399 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 LINC00299Q6ZSB3 139 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 NPAS3Q8IXF0 933 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 OXR1Q8N573 874 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 TCEANCQ8N8B7 351 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 GPR150Q8NGU9 434 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 OR5AK3PQ8NH89 298 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 GPR78Q96P69 363 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 ERMAPQ96PL5 475 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 UCK2Q9BZX2 261 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 SLA2Q9H6Q3 261 aa11.08□□□□□ -0.64
CLSTN3-201ENST00000266546 EDDM13A0A1B0GTR0 161 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 OR2AG2A6NM03 316 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CLDN24A6NM45 220 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 OR5F1O95221 314 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CXCR2P25025 360 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CLDN8P56748 225 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 GMFBP60983 142 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 PLA2G4EQ3MJ16 856 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 NOXRED1Q6NXP6 359 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM124AQ86V42 546 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 PHC2Q8IXK0 858 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 C10orf53Q8N6V4 93 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 NFKBIDQ8NI38 313 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 DOHHQ9BU89 302 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CTPS2Q9NRF8 586 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 IL36AQ9UHA7 158 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 ERVW-1Q9UQF0 538 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CLDN7O95471 211 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 CTSEP14091 401 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 C21orf33P30042 268 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 SUOXP51687 545 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 EIF4EBP2Q13542 120 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 ADAMTS16Q8TE57 1224 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 USP7Q93009 1102 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 VMP1Q96GC9 406 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 PLAC1Q9HBJ0 212 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 DNMT3BQ9UBC3 853 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 RHCGQ9UBD6 479 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 A0A1W2PRB8 838 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 H3BNC9 293 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 PLD2O14939 933 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 ITGAMP11215 1152 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 VIPR1P32241 457 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 HNMTP50135 292 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 SNRPD2P62316 118 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 DHCR24Q15392 516 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 RAET1GQ6H3X3 334 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 FAIM2Q9BWQ8 316 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 RDH8Q9NYR8 311 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 MBD2Q9UBB5 411 aa11.07□□□□□ -0.64
CLSTN3-201ENST00000266546 C1QAP02745 245 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 CD1EP15812 388 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 PIGAP37287 484 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 ERVK-21P61565 698 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 ADAM15Q13444 863 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 BCL7AQ4VC05 210 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 NKX2-4Q9H2Z4 354 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 HCFC1R1Q9NWW0 138 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 H1F0P07305 194 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 HMGCLP35914 325 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 GPR1P46091 355 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 STARP49675 285 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 CBX2Q14781 532 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 C18orf21Q32NC0 220 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 TIGD4Q8IY51 512 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 APCDD1Q8J025 514 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 Q8N402 240 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 TXNDC15Q96J42 360 aa11.06□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF583Q96ND8 569 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms