RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SERPINA4P29622 427 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 DNASE1L1P49184 302 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 RAB13P51153 203 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 EMP3P54852 163 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 HTRA4P83105 476 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TAF1AQ15573 450 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 UGT3A2Q3SY77 523 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 NOL9Q5SY16 702 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 LIPKQ5VXJ0 399 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 C22orf42Q6IC83 251 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 CAPN13Q6MZZ7 669 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ESRP1Q6NXG1 681 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 B3GNT8Q7Z7M8 397 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 PTRH1Q86Y79 214 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 OR5B17Q8NGF7 314 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 OR5T3Q8NGG3 340 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 OR9I1Q8NGQ6 314 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 COPS5Q92905 334 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TAAR8Q969N4 342 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 FKBP10Q96AY3 582 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SLC2A11Q9BYW1 496 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TRBC2A0A5B9 178 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 AGAP14A8MT82 685 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TPOP07202 933 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SMIM6P0DI80 62 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 PRKACGP22612 351 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 WNT4P56705 351 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 COL13A1Q5TAT6 717 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TMPRSS11BQ86T26 416 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 OOSP2Q86WS3 158 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SYT14Q8NB59 555 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 FATE1Q969F0 183 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TMEM74Q96NL1 305 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SEMA3CQ99985 751 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 YIPF4Q9BSR8 244 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SGK2Q9HBY8 427 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ASF1BQ9NVP2 202 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 EIF2B4Q9UI10 523 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 G3V2L1 256 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 NARSO43776 548 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ALDOBP05062 364 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 RHOQP17081 205 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SERPINF1P36955 418 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 CHRNA6Q15825 494 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ATAT1Q5SQI0 421 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ZBTB37Q5TC79 503 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 AADACL4Q5VUY2 407 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ELP2Q6IA86 826 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 MED27Q6P2C8 311 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 FAM199XQ6PEV8 388 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 KIAA1324Q6UXG2 1013 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ZNF783Q6ZMS7 281 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 UBE2R2Q712K3 238 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 PIGZQ86VD9 579 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 POMGNT2Q8NAT1 580 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 GLIS1Q8NBF1 620 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 LILRB1Q8NHL6 650 aaPredicted RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 CLCC1Q96S66 551 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 NAA50Q9GZZ1 169 aaKnown RBP8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ABCG4Q9H172 646 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 TPT1P8Q9HAU6 139 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ABRACLQ9P1F3 81 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 GNG8Q9UK08 70 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 ACTL7AQ9Y615 435 aa8.03□□□□□ -1.12
SNCAIP-201ENST00000261367 SLC12A8A0AV02 714 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 TMEM233B4DJY2 109 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 FARS2O95363 451 aaKnown RBP8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 IL1R2P27930 398 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 RGS8P57771 180 aaPredicted RBP8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 ACTA2P62736 377 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 ACTG2P63267 376 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 OGDHQ02218 1023 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 ALG11Q2TAA5 492 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 DALRD3Q5D0E6 543 aaKnown RBP8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 C6orf136Q5SQH8 315 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 PROKR2Q8NFJ6 384 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 SPATA22Q8NHS9 363 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 TMEM203Q969S6 136 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 OR2M4Q96R27 311 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 MRIQ9BWK5 157 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 TMPRSS11EQ9UL52 423 aa8.02□□□□□ -1.12
SNCAIP-201ENST00000261367 IQCMA0A1B0GVH7 501 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 RFXAPO00287 272 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 TP73O15350 636 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 KAT7O95251 611 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 F10P00742 488 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 LCKP06239 509 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 CD1EP15812 388 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 JUNDP17535 347 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 AQP1P29972 269 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 KDELR2P33947 212 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 IDUAP35475 653 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 HOXA1P49639 335 aaPredicted RBP8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 RGS19P49795 217 aa8.02□□□□□ -1.13
SNCAIP-201ENST00000261367 CDK6Q00534 326 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms