RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 GORASP2Q9H8Y8 452 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 RMI1Q9H9A7 625 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 HRASLS2Q9NWW9 162 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 SPATA7Q9P0W8 599 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 ATG4BQ9Y4P1 393 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 MDC1Q14676 2089 aaKnown RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 FAM220BPB1ANY3 271 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 B4GAT1O43505 415 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 MITFO75030 526 aaPredicted RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 SRFP11831 508 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 VLDLRP98155 873 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 DMPKQ09013 629 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 MERTKQ12866 999 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 XAGE5Q8WWM1 108 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 COQ8BQ96D53 544 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 FCRL1Q96LA6 429 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 BBS4Q96RK4 519 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 OSBPL11Q9BXB4 747 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 VNN3Q9NY84 501 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 DOLKQ9UPQ8 538 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 DLGAP1O14490 977 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 DNAJB6O75190 326 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 NDUFS2O75306 463 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 CDK9P50750 372 aaKnown RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 MAP7Q14244 749 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 NHSL2Q5HYW2 709 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 C1QTNF12Q5T7M4 302 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 TTC33Q6PID6 262 aaPredicted RBP12.73□□□□□ -0.37
USP5-201ENST00000229268 CALHM3Q86XJ0 350 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 OR5D16Q8NGK9 328 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP5-201ENST00000229268 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 FBRSQ9HAH7 460 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 PELI2Q9HAT8 420 aa12.73□□□□□ -0.37
USP5-201ENST00000229268 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 KRBA1A5PL33 1030 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 GPR37L1O60883 481 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 COQ9O75208 318 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 TNFP01375 233 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 ALBP02768 609 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 FOSL2P15408 326 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 JUNDP17535 347 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 GPX2P18283 190 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 FUT4P22083 530 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 CEACAM20Q6UY09 585 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 NRROSQ86YC3 692 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 STARD8Q92502 1023 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 NMD3Q96D46 503 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 DUS3LQ96G46 650 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 MYNNQ9NPC7 610 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 WASH6PQ9NQA3 447 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 RHCGQ9UBD6 479 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 UNC13CQ8NB66 2214 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 LOC105369274A0A096LPK9 316 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 LOC102723532A0A0G2JNH3 316 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 RNASET2O00584 256 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 PDPK1O15530 556 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 DENRO43583 198 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 ERGP11308 486 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 EEF1B2P24534 225 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 OR4N4Q8N0Y3 316 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 ACOT4Q8N9L9 421 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 ADNPQ9H2P0 1102 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 SMPD3Q9NY59 655 aaPredicted RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 CPNE7Q9UBL6 633 aa12.72□□□□□ -0.37
USP5-201ENST00000229268 APOBEC3BQ9UH17 382 aaKnown RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
USP5-201ENST00000229268 SERTM1A2A2V5 107 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 CCNDBP1O95273 360 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 CLPTM1O96005 669 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 NCBP2P52298 156 aaKnown RBP eCLIP12.71□□□□□ -0.377e-7■□□□□ 8.2
USP5-201ENST00000229268 ARSFP54793 590 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 MAZP56270 477 aaKnown RBP12.71□□□□□ -0.37
USP5-201ENST00000229268 ZNF33BQ06732 778 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 SLC9A5Q14940 896 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 TRIM40Q6P9F5 258 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 MARVELD2Q8N4S9 558 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 CREB3L4Q8TEY5 395 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
USP5-201ENST00000229268 ASPSCR1Q9BZE9 553 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 BHLHE41Q9C0J9 482 aaPredicted RBP12.71□□□□□ -0.37
USP5-201ENST00000229268 KIR3DX1Q9H7L2 352 aa12.71□□□□□ -0.37
USP5-201ENST00000229268 ZNF282Q9UDV7 671 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms