RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MEAF6Q9HAF1 191 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 SIRT5Q9NXA8 310 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 PCDHGA6Q9Y5G7 932 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 FER1L5A0AVI2 2057 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 LSM1O15116 133 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 EEDO75530 441 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 FHP07954 510 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 VIMP08670 466 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ZGLP1P0C6A0 271 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 FAM58BPP0C7Q3 252 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 CPN2P22792 545 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 RPL38P63173 70 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 BROXQ5VW32 411 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 Q6ZSR9 355 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 GPR180Q86V85 440 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 OR2T11Q8NH01 316 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 PPP1R36Q96LQ0 422 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 FBXW2Q9UKT8 454 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 PTRH2Q9Y3E5 179 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 CCL27Q9Y4X3 112 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ASPMQ8IZT6 3477 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ATP6AP2A0A1C7CYW4 349 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 VSTM2BA6NLU5 285 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 CLDN4O14493 209 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ATP6AP2O75787 350 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 BMP10O95393 424 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 TGDSO95455 350 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 CYC1P08574 325 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 TPP2P29144 1249 aaPredicted RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 EIF2S3P41091 472 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 TRA2BP62995 288 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 RUNX2Q13950 521 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 MINDY4Q4G0A6 757 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 VWA2Q5GFL6 755 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ZC3H7AQ8IWR0 971 aaKnown RBP19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 LRRC34Q8IZ02 419 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 OR2Y1Q8NGV0 311 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 DCBLD2Q96PD2 775 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 SIKE1Q9BRV8 207 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 ACTL8Q9H568 366 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 TCFL5Q9UL49 500 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 USH1CQ9Y6N9 552 aa19.06■□□□□ 0.64
RHBDD3-201ENST00000216085 RRP9O43818 475 aaKnown RBP19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 EDF1O60869 148 aaKnown RBP19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 PEX11AO75192 247 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 GBAP04062 536 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 LIFP15018 202 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 MC1RQ01726 317 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 SMU1Q2TAY7 513 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 TUBB8Q3ZCM7 444 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 VASH2Q86V25 355 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 PARP9Q8IXQ6 854 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 ZNF595Q8IYB9 648 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 FNDC5Q8NAU1 212 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 ZSCAN1Q8NBB4 408 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 CCNL2Q96S94 520 aaPredicted RBP19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 MAPKAP1Q9BPZ7 522 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 CRB3Q9BUF7 120 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 FAIM2Q9BWQ8 316 aa19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 SOX17Q9H6I2 414 aaPredicted RBP19.05■□□□□ 0.64
RHBDD3-201ENST00000216085 SYNDIG1LA6NDD5 238 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 IGHEP01854 428 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 JUNP05412 331 aaKnown RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 HEXBP07686 556 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 ANXA4P09525 319 aaPredicted RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 ACPPP15309 386 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 TNFRSF17Q02223 184 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 ZNF763Q0D2J5 394 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 NOXRED1Q6NXP6 359 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 PROSER1Q86XN7 944 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 PRSS58Q8IYP2 241 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 FAM47BQ8NA70 645 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 C7orf57Q8NEG2 295 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 VPS50Q96JG6 964 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 C3orf30Q96M34 536 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 SPSB2Q99619 263 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 RBCK1Q9BYM8 510 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 MKL2Q9ULH7 1088 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 EIF3LQ9Y262 564 aaKnown RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 WBP11Q9Y2W2 641 aaKnown RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 POLR3HQ9Y535 204 aaPredicted RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 FRYQ5TBA9 3013 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 TERTO14746 1132 aaKnown RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 PCDH17O14917 1159 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 TMPRSS11DO60235 418 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 TROVE2P10155 538 aaKnown RBP eCLIP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 NR2F6P10588 404 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 PPP2R1BP30154 601 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 KLC1Q07866 573 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 MRM1Q6IN84 353 aaKnown RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 ACAD11Q709F0 780 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 METTL21AQ8WXB1 218 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 STARD8Q92502 1023 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 C11orf24Q96F05 449 aaPredicted RBP19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 EBPLQ9BY08 206 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 TRIM55Q9BYV6 548 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 SEMA3GQ9NS98 782 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 MMACHCQ9Y4U1 282 aa19.04■□□□□ 0.64
RHBDD3-201ENST00000216085 DIAPH2O60879 1101 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms