RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 GPR25O00155 361 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 NRP1O14786 923 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CAPN5O15484 640 aaPredicted RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 PCDH7O60245 1069 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 STBD1O95210 358 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SSTR4P31391 388 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 LILRA4P59901 499 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CDK5R2Q13319 367 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 GRB7Q14451 532 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 LINC00471Q8N535 108 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 FRS2Q8WU20 508 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PCED1BQ96HM7 432 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MROQ9BYG7 248 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 QRSL1Q9H0R6 528 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 OR51J1Q9H342 316 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MEAF6Q9HAF1 191 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 NMUR1Q9HB89 426 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 GNG8Q9UK08 70 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 A0A0G2JLL6 359 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 CAPN14A8MX76 684 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 E7EQ34 232 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ENPP3O14638 875 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 GOSR2O14653 212 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 KAT7O95251 611 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 BCHEP06276 602 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SMPD1P17405 629 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ADH6P28332 368 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 RAB5CP51148 216 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CAPZA1P52907 286 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 DAOAP59103 153 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 MAD2L1BPQ15013 274 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 TMEM69Q5SWH9 247 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ATXN7L2Q5T6C5 722 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 NCBP2-AS2Q69YL0 99 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 GTF2IRD2BQ6EKJ0 949 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ENPP6Q6UWR7 440 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 PRRT2Q7Z6L0 340 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 GTF2IRD2Q86UP8 949 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 C12orf45Q8N5I9 185 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 OR4F6Q8NGB9 312 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 OR5T3Q8NGG3 340 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ADAMTS16Q8TE57 1224 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SNX18Q96RF0 628 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 HEBP2Q9Y5Z4 205 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 TTLL8A6PVC2 850 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 IFNA10P01566 189 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CAPNS1P04632 268 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 IFNA4P05014 189 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CAPN3P20807 821 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 TPMTP51580 245 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 PRR5P85299 388 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 BAIAP2L2Q6UXY1 529 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SLC16A9Q7RTY1 509 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CHCHD4Q8N4Q1 142 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CD99L2Q8TCZ2 262 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 C12orf42Q96LP6 360 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 COQ4Q9Y3A0 265 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 A0A1W2PQ09 198 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 FHP07954 510 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF705DP0CH99 300 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF705BP0CI00 300 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 PRKXP51817 358 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 MLLT10P55197 1068 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 OLIG2Q13516 323 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CEACAM19Q7Z692 300 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 TSPYL5Q86VY4 417 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 SAMD14Q8IZD0 417 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 NXPE1Q8N323 547 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 STK35Q8TDR2 534 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SLC2A6Q9UGQ3 507 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 H3BSH0 61 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SULT1C2O00338 296 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SNAPINO95295 136 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 ZNF155Q12901 538 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 GINS1Q14691 196 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 TAF1AQ15573 450 aaPredicted RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 TATDN3Q17R31 274 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 RASGEF1AQ8N9B8 481 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 OR14C36Q8NHC7 312 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 PHB2Q99623 299 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 PRRG4Q9BZD6 226 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 NPAP1Q9NZP6 1156 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 FBXW11Q9UKB1 542 aa10.07□□□□□ -0.8
VCL-201ENST00000211998 C14orf166Q9Y224 244 aaKnown RBP10.07□□□□□ -0.8
VCL-201ENST00000211998 LOC105369274A0A096LPK9 316 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ZNF878C9JN71 531 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms