RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 CIDECQ96AQ7 238 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CAPNS2Q96L46 248 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 FCRL1Q96LA6 429 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CASD1Q96PB1 797 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 PKP4Q99569 1192 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SPATA9Q9BWV2 254 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ABCB8Q9NUT2 735 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 PAQR5Q9NXK6 330 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ATPIF1Q9UII2 106 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SMIM30A4D0T7 59 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CAPN5O15484 640 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SOCS5O75159 536 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ENTPD6O75354 484 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ITGA2P17301 1181 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ETV6P41212 452 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CTSOP43234 321 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 LIMK1P53667 647 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CCL23P55773 120 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 AP1S2P56377 157 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 FKBP1BP68106 108 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CDK6Q00534 326 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 RUNX1T1Q06455 604 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 LRRC74AQ0VAA2 488 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SLAMF1Q13291 335 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 IER5LQ5T953 404 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 USP45Q70EL2 814 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CADM2Q8N3J6 435 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 LMNTD1Q8N9Z9 388 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 HUS1BQ8NHY5 278 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 SCAMP4Q969E2 229 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 OPALINQ96PE5 141 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 MCCC1Q96RQ3 725 aaPredicted RBP10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 UQCC2Q9BRT2 126 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 BARHL1Q9BZE3 327 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ZDHHC6Q9H6R6 413 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 ACER3Q9NUN7 267 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 NINQ8N4C6 2090 aa10.07□□□□□ -0.8
CX3CL1-201ENST00000006053 A0A1W2PQ09 198 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TMEM88BA6NKF7 163 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 AGAP14A8MT82 685 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 NPIPB8E9PQR5 432 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 GFYI3L273 518 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 SCO2O43819 266 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 IGFBP1P08833 259 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CTRB1P17538 263 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 POLR2CP19387 275 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 PXNP49023 591 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CRISP1P54107 249 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 ELAVL2Q12926 359 aaKnown RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 GPR50Q13585 617 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TXNDC8Q6A555 127 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CTRB2Q6GPI1 263 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 AGTRAPQ6RW13 159 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 KLHL17Q6TDP4 642 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 OTOP2Q7RTS6 562 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 BCDIN3DQ7Z5W3 292 aaKnown RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 DBF4BQ8NFT6 615 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 OR2AP1Q8NGE2 309 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 ASB15Q8WXK1 588 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 ST6GAL2Q96JF0 529 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 PIP5K1AQ99755 562 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CDCA4Q9BXL8 241 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 NMNAT1Q9HAN9 279 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 RNF186Q9NXI6 227 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TMPRSS11EQ9UL52 423 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CEP290O15078 2479 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TRBC2A0A5B9 178 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 MEIOCA2RUB1 952 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TMEM202A6NGA9 273 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 ARHGEF33A8MVX0 844 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 B8ZZF3 427 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CSF2P04141 144 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 FHP07954 510 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 MPC1LP0DKB6 136 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 PCSK2P16519 638 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 PTX3P26022 381 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 BDKRB1P46663 353 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 RFX2P48378 723 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 POU6F2P78424 691 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 LMAN2Q12907 356 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 FAM214AQ32MH5 1076 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 FRMPD2BQ6IN97 320 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 TMPRSS11BQ86T26 416 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 GPR65Q8IYL9 337 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 CHAC2Q8WUX2 184 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 SCRN2Q96FV2 425 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 SAMD11Q96NU1 681 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 SNX18Q96RF0 628 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 RSPH9Q9H1X1 276 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 HHATLQ9HCP6 504 aa10.06□□□□□ -0.8
CX3CL1-201ENST00000006053 A0A1W2PQ72 361 aa10.05□□□□□ -0.8
CX3CL1-201ENST00000006053 H3BN98 237 aa10.05□□□□□ -0.8
CX3CL1-201ENST00000006053 IL7P13232 177 aa10.05□□□□□ -0.8
CX3CL1-201ENST00000006053 PSMA1P25786 263 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms