RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MAPK10P53779 464 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 CDK6Q00534 326 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 DCTN2Q13561 401 aaKnown RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 KIAA1614Q5VZ46 1190 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 ZC3H7AQ8IWR0 971 aaKnown RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 LINC01555Q8NAE3 123 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 TP53I13Q8NBR0 393 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-211ENST00000641213 MUL1Q969V5 352 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 TM4SF18Q96CE8 201 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 EPS8L2Q9H6S3 715 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 LYVE1Q9Y5Y7 322 aa16.29■□□□□ 0.2
PHGDH-211ENST00000641213 E9PQ18 207 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 ACP5P13686 325 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 JUNDP17535 347 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 DDCP20711 480 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 UQCRC2P22695 453 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 GDI1P31150 447 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 NPRL3Q12980 569 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 MLF2Q15773 248 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-211ENST00000641213 IFI44LQ53G44 452 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-211ENST00000641213 FERD3LQ96RJ6 166 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 MYADMQ96S97 322 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 INSM2Q96T92 566 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CXorf36Q9H7Y0 433 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 TMEM184CQ9NVA4 438 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 TESMINQ9Y4I5 508 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 DGKBQ9Y6T7 804 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 ADAMDEC1O15204 470 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CAPN5O15484 640 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-211ENST00000641213 ARAFP10398 606 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 ITIH1P19827 911 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CCNA2P20248 432 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CD247P20963 164 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 TEAD1P28347 426 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 OR1E2P47887 323 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CXCR4P61073 352 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 DMPKQ09013 629 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CRB2Q5IJ48 1285 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 NUDT18Q6ZVK8 323 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 RAB2BQ8WUD1 216 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 LZICQ8WZA0 190 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 C12orf66Q96MD2 445 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 PITX2Q99697 317 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 CCDC90BQ9GZT6 254 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 ABCG4Q9H172 646 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 NT5DC2Q9H857 520 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 LHX9Q9NQ69 397 aa16.28■□□□□ 0.2
PHGDH-211ENST00000641213 PHPT1Q9NRX4 125 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-211ENST00000641213 MDC1Q14676 2089 aaKnown RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 TNFRSF11BO00300 401 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 LINC01565O15544 149 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 LATO43561 262 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 TBX19O60806 448 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 SERPINB1P30740 379 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 SOX9P48436 509 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 EMP3P54852 163 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 PCBP3P57721 371 aaKnown RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 RPP38P78345 283 aaKnown RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 NFATC3Q12968 1075 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 MAD2L1BPQ15013 274 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 ITPRIPL2Q3MIP1 535 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 SYCE2Q6PIF2 218 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 PARM1Q6UWI2 310 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 PAGE2Q7Z2X7 111 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 CCDC71Q8IV32 467 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 GIPC3Q8TF64 312 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 FGF14Q92915 247 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF300Q96RE9 604 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 CSF3RQ99062 836 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 CDCA3Q99618 268 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 DGCR6LQ9BY27 220 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 NLNQ9BYT8 704 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 PITHD1Q9GZP4 211 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 OSGEPL1Q9H4B0 414 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 DUSP21Q9H596 190 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 SLAMF7Q9NQ25 335 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 THSD1Q9NS62 852 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 ERVK-18Q9QC07 812 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 WBP11Q9Y2W2 641 aaKnown RBP16.27■□□□□ 0.2
PHGDH-211ENST00000641213 TPRKBQ9Y3C4 175 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 PCDHGB1Q9Y5G3 927 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 SNX8Q9Y5X2 465 aa16.27■□□□□ 0.2
PHGDH-211ENST00000641213 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 OR1F1O43749 312 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 INMTO95050 263 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 SLC35A2P78381 396 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 EMX1Q04741 257 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-211ENST00000641213 SHHQ15465 462 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 FKBP10Q96AY3 582 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 THAP11Q96EK4 314 aa16.26■□□□□ 0.19
PHGDH-211ENST00000641213 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms