RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 COL27A1Q8IZC6 1860 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-210ENST00000641115 KLHL18O94889 574 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 CSTF2P33240 577 aaKnown RBP eCLIP18.81■□□□□ 0.6
PHGDH-210ENST00000641115 RASSF2P50749 326 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 MXRA7P84157 204 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 KLC1Q07866 573 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 MUM1Q2TAK8 710 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 FAM214AQ32MH5 1076 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 VPS26BQ4G0F5 336 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 TIGD2Q4W5G0 525 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 FAM71E1Q6IPT2 247 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 TLDC1Q6P9B6 456 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 CYB5D1Q6P9G0 228 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 ASCL5Q7RTU5 278 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 R3HCC1LQ7Z5L2 792 aaKnown RBP18.81■□□□□ 0.6
PHGDH-210ENST00000641115 B3GNT8Q7Z7M8 397 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 ARHGEF39Q8N4T4 335 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 OR1L3Q8NH93 324 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 ZNF501Q96CX3 271 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-210ENST00000641115 FAIM2Q9BWQ8 316 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 REEP4Q9H6H4 257 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 MIEF1Q9NQG6 463 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 NDUFAF1Q9Y375 327 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 NAALAD2Q9Y3Q0 740 aa18.81■□□□□ 0.6
PHGDH-210ENST00000641115 A0A1W2PP18 115 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 CFLARO15519 480 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 GALR3O60755 368 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-210ENST00000641115 CAPN3P20807 821 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 S100A3P33764 101 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 LIMK1P53667 647 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 SNRPNP63162 240 aaKnown RBP18.8■□□□□ 0.6
PHGDH-210ENST00000641115 FAM53BQ14153 422 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 TRIP6Q15654 476 aaKnown RBP18.8■□□□□ 0.6
PHGDH-210ENST00000641115 SPRED3Q2MJR0 410 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 SPANXN4Q5MJ08 99 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 MRM1Q6IN84 353 aaKnown RBP18.8■□□□□ 0.6
PHGDH-210ENST00000641115 EFCAB3Q8N7B9 438 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 AGBL5Q8NDL9 886 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 TM4SF18Q96CE8 201 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 RCN3Q96D15 328 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 MTERF3Q96E29 417 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 C10orf90Q96M02 699 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 PHOX2BQ99453 314 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 RTKNQ9BST9 563 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.8■□□□□ 0.69e-8■■■□□ 19.1
PHGDH-210ENST00000641115 PHF11Q9UIL8 331 aa18.8■□□□□ 0.6
PHGDH-210ENST00000641115 H3BMH7 237 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 PGRP06401 933 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 DDX5P17844 614 aaKnown RBP18.79■□□□□ 0.6
PHGDH-210ENST00000641115 DGKQP52824 942 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 SRSF11Q05519 484 aaKnown RBP18.79■□□□□ 0.6
PHGDH-210ENST00000641115 FOXM1Q08050 763 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 UGT8Q16880 541 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 PGS1Q32NB8 556 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 REP15Q6BDI9 236 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 PRSS41Q7RTY9 318 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 GLRX5Q86SX6 157 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 GPR180Q86V85 440 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 PDSS2Q86YH6 399 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 OR7A2PQ8NGA2 310 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 VPS33AQ96AX1 596 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 PPCDCQ96CD2 204 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 OR6C1Q96RD1 312 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 NDC1Q9BTX1 674 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 EFCAB1Q9HAE3 211 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 ATAD3AQ9NVI7 634 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 TEX10Q9NXF1 929 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-210ENST00000641115 FBXW2Q9UKT8 454 aa18.79■□□□□ 0.6
PHGDH-210ENST00000641115 ZNF860A6NHJ4 632 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 AGRPO00253 132 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 AIM2O14862 343 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 FURINP09958 794 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 DDCP20711 480 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 CCKBRP32239 447 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 KIR3DL1P43629 444 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 ALDH9A1P49189 494 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 NUDT2P50583 147 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 PDX1P52945 283 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 HNRNPH2P55795 449 aaKnown RBP18.78■□□□□ 0.6
PHGDH-210ENST00000641115 MC1RQ01726 317 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 NHLH1Q02575 133 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 COQ5Q5HYK3 327 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 CPTPQ5TA50 214 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 NDUFAF5Q5TEU4 345 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 YOD1Q5VVQ6 348 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-210ENST00000641115 CAMKMTQ7Z624 323 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 PCYOX1LQ8NBM8 494 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 OR9A4Q8NGU2 314 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 NUDT8Q8WV74 236 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 OR52E6Q96RD3 313 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 NPLQ9BXD5 320 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-210ENST00000641115 LYRM4Q9HD34 91 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 SLC52A3Q9NQ40 469 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 CUTCQ9NTM9 273 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 MS4A12Q9NXJ0 267 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 SIDT1Q9NXL6 827 aaKnown RBP18.78■□□□□ 0.6
PHGDH-210ENST00000641115 AKAP7Q9P0M2 348 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-210ENST00000641115 SH3BP4Q9P0V3 963 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 ATP6V1HQ9UI12 483 aa18.78■□□□□ 0.6
PHGDH-210ENST00000641115 LEF1Q9UJU2 399 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms