RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TBX6O95947 436 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 NCF1P14598 390 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 PTGER1P34995 402 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 GGT5P36269 586 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 MEOX1P50221 254 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 RAB38P57729 211 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 POU4F1Q01851 419 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 ADPRMQ3LIE5 342 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 NCCRP1Q6ZVX7 275 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 ZBED8Q8IZ13 594 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 ZNF295-AS1Q8N0V1 137 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 TMEM52Q8NDY8 209 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 PHF10Q8WUB8 498 aaKnown RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 CCT6BQ92526 530 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 TRIM8Q9BZR9 551 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 PRTFDC1Q9NRG1 225 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 SMYD2Q9NRG4 433 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 ZNF223Q9UK11 482 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 FBXW2Q9UKT8 454 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 MTO1Q9Y2Z2 717 aaKnown RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 SNX24Q9Y343 169 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 SAR1BQ9Y6B6 198 aa17.22■□□□□ 0.35
CLN6-220ENST00000637450 NCOA6Q14686 2063 aaPredicted RBP17.22■□□□□ 0.35
CLN6-220ENST00000637450 A0A088AWK7 358 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 USP27XA6NNY8 438 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 PRRG2O14669 202 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 B3GALT2O43825 422 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 PEX1O43933 1283 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 ITGA10O75578 1167 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 PIAS1O75925 651 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
CLN6-220ENST00000637450 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 RPL21P46778 160 aaKnown RBP17.21■□□□□ 0.35
CLN6-220ENST00000637450 HNRNPFP52597 415 aaKnown RBP17.21■□□□□ 0.35
CLN6-220ENST00000637450 PLA2G16P53816 162 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 SLC12A2P55011 1212 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 GNG11P61952 73 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 CDKL4Q5MAI5 379 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 VN1R5Q7Z5H4 357 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 ZNF595Q8IYB9 648 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 SPATA6LQ8N4H0 392 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 TMEM156Q8N614 296 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 C16orf52Q8NHV5 167 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 NCLNQ969V3 563 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 VMP1Q96GC9 406 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 DMRTA2Q96SC8 542 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 TMEM79Q9BSE2 394 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 REXO4Q9GZR2 422 aaKnown RBP17.21■□□□□ 0.35
CLN6-220ENST00000637450 EHD1Q9H4M9 534 aa17.21■□□□□ 0.35
CLN6-220ENST00000637450 ZNF490Q9ULM2 529 aaPredicted RBP17.21■□□□□ 0.35
CLN6-220ENST00000637450 TEP1Q99973 2627 aaKnown RBP17.2■□□□□ 0.34
CLN6-220ENST00000637450 ANKDD1BA6NHY2 528 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 CYR61O00622 381 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 PRAMEF4O60810 478 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 PAFAH1B1P43034 410 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 KIR3DL1P43629 444 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 SLC13A2Q13183 592 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 PRAMEF9Q5VWM5 478 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 ABHD17CQ6PCB6 329 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 C3P1Q6ZMU1 363 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 MDGA2Q7Z553 956 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 GPSM1Q86YR5 675 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 EID3Q8N140 333 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 CYP4Z2PQ8N1L4 340 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 TCAIMQ8N3R3 496 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 OR2L5Q8NG80 312 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 LURAP1Q96LR2 239 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 CAB39LQ9H9S4 337 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 DNAJC11Q9NVH1 559 aa17.2■□□□□ 0.34
CLN6-220ENST00000637450 MRPS33Q9Y291 106 aaKnown RBP17.2■□□□□ 0.34
CLN6-220ENST00000637450 YARS2Q9Y2Z4 477 aaKnown RBP17.2■□□□□ 0.34
CLN6-220ENST00000637450 A0A1B0GTH9 108 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 TMEM200CA6NKL6 621 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 CXorf49A8MYA2 514 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 TFECO14948 347 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 CLGNO14967 610 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 PRKNO60260 465 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 STK16O75716 305 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 ZFAND5O76080 213 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 CCDC166P0CW27 439 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 TFEBP19484 476 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 HPDP32754 393 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 PTGS2P35354 604 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 RFC3P40938 356 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 SSR4P51571 173 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 LIM2P55344 173 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 GTF3C1Q12789 2109 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 CMPK2Q5EBM0 449 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 FBXO48Q5FWF7 155 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 SULT1C3Q6IMI6 304 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 TRIM40Q6P9F5 258 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 CAPN12Q6ZSI9 719 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 FAM47BQ8NA70 645 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 ZFP62Q8NB50 900 aaPredicted RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 FAM57AQ8TBR7 257 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 PYROXD1Q8WU10 500 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 WDR34Q96EX3 536 aa17.19■□□□□ 0.34
CLN6-220ENST00000637450 PTCD3Q96EY7 689 aaKnown RBP17.19■□□□□ 0.34
CLN6-220ENST00000637450 TSPAN17Q96FV3 270 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms