RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 BRCA2P51587 3418 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A087X002 238 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A1W2PR80 420 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TCRBV21S2A2A0A5A6 115 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C15orf61A6NNL5 157 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 YDJCA8MPS7 323 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 E5RGE8 158 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CCL24O00175 119 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC1A7O00341 560 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PPIP5K2O43314 1243 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DCXO43602 365 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SPRY1O43609 319 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 IDH3BO43837 385 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 OR10H2O60403 315 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TOMM70O94826 608 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HPRP00739 348 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DNTTP04053 509 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RPN1P04843 607 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ATP1B1P05026 303 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SERPING1P05155 500 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RPLP0P05388 317 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FYNP06241 537 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 GPIP06744 558 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HSP90AA1P07900 732 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC175P0C221 793 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DANCRP0C864 163 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 NR2F1P10589 423 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HSPA5P11021 654 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 EEF2P13639 858 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PDGFRAP16234 1089 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CAPN2P17655 700 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CYP11B2P19099 503 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 AOC1P19801 751 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CD22P20273 847 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 GATA2P23769 480 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ACAT1P24752 427 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ELAVL4P26378 380 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CD27P26842 260 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HLA-FP30511 346 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SSTR1P30872 391 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PRKAR2BP31323 418 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 EPHX2P34913 555 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PTGER4P35408 488 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SOX3P41225 446 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HNF4AP41235 474 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PRKCIP41743 596 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 EPS15P42566 896 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RAD52P43351 418 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LEPRP48357 1165 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LHX1P48742 406 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 VAMP7P51809 220 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HUNKP57058 714 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DCDC1P59894 354 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HNRNPKP61978 463 aaKnown RBP eCLIP0.94□□□□□ -2.264e-10■■■■□ 21
SMARCB1-209ENST00000635578 RASGEF1BQ0VAM2 473 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PEX6Q13608 980 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TRIM29Q14134 588 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 COG2Q14746 738 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MTF1Q14872 753 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FASTKD3Q14CZ7 662 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RBBP7Q16576 425 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF74Q16587 644 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SHROOM1Q2M3G4 852 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 VWC2Q2TAL6 325 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ALDH1L2Q3SY69 923 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LACTB2Q53H82 288 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C2CD6Q53TS8 623 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TCTEX1D4Q5JR98 221 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C1orf141Q5JVX7 400 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SPDYCQ5MJ68 293 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ERMARDQ5T6L9 678 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CST9LP1Q5W188 147 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 UGT3A1Q6NUS8 523 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FAAP20Q6NZ36 180 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TTC27Q6P3X3 843 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FUT10Q6P4F1 479 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC25A47Q6Q0C1 308 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 IL27RAQ6UWB1 636 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LCLAT1Q6UWP7 414 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ENPP7Q6UWV6 458 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 METTL7BQ6UX53 244 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CHST3Q7LGC8 479 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PLPPR4Q7Z2D5 763 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ZER1Q7Z7L7 766 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ADGRA1Q86SQ6 560 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PRPF39Q86UA1 669 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DZIP1Q86YF9 867 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM219AQ8IW50 185 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 OR4N5Q8IXE1 308 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 KLHL7Q8IXQ5 586 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LMNTD2Q8IXW0 634 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC34A3Q8N130 599 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 OR8H2Q8N162 312 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CCAR2Q8N163 923 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DCLK2Q8N568 766 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LRTM2Q8N967 370 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RASGEF1AQ8N9B8 481 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 IQUBQ8NA54 791 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 AQP11Q8NBQ7 271 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC191Q8NCU4 936 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms