RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 EPYCQ99645 322 aa16.71■□□□□ 0.27
FAM3A-222ENST00000621967 EPHX3Q9H6B9 360 aa16.71■□□□□ 0.27
FAM3A-222ENST00000621967 CCNB1IP1Q9NPC3 277 aa16.71■□□□□ 0.27
FAM3A-222ENST00000621967 KRT84Q9NSB2 600 aa16.71■□□□□ 0.27
FAM3A-222ENST00000621967 SIRT5Q9NXA8 310 aa16.71■□□□□ 0.27
FAM3A-222ENST00000621967 THUMPD1Q9NXG2 353 aaKnown RBP16.71■□□□□ 0.27
FAM3A-222ENST00000621967 TMEM229AB2RXF0 380 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 SLC22A1O15245 554 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 LAMTOR5O43504 91 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 SULT1C4O75897 302 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 FKBP9O95302 570 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 C9P02748 559 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ELFN1P0C7U0 828 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 IDSP22304 550 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 NR4A1P22736 598 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PCGF2P35227 344 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 MAPK9P45984 424 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 BDKRB1P46663 353 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 KCNC4Q03721 635 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 GAB1Q13480 694 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 NR1D2Q14995 579 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 RGNQ15493 299 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ADNP2Q6IQ32 1131 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 EGFL6Q8IUX8 553 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CCDC71Q8IV32 467 aaPredicted RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 OR7G3Q8NG95 312 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CDC26Q8NHZ8 85 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 MED8Q96G25 268 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 WRAP53Q9BUR4 548 aaKnown RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CD93Q9NPY3 652 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ITM2CQ9NQX7 267 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 USP36Q9P275 1121 aaKnown RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CYP8B1Q9UNU6 501 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ERGIC3Q9Y282 383 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PADI2Q9Y2J8 665 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 TDRKHQ9Y2W6 561 aaKnown RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 SPINT1O43278 529 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PLRG1O43660 514 aaKnown RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF217O75362 1048 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PCDH8O95206 1070 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 SLC16A8O95907 504 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ANXA4P09525 319 aaPredicted RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 NUDT7P0C024 238 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 EPHA2P29317 976 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 HPCAL1P37235 193 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 OPRL1P41146 370 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PREPP48147 710 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ADPRHP54922 357 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 IL1RL1Q01638 556 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 MVKQ03426 396 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 LRRC74AQ0VAA2 488 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF284Q2VY69 593 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CENPSQ8N2Z9 138 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 LILRA3Q8N6C8 439 aaPredicted RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 VPS37AQ8NEZ2 397 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CXorf40AQ8TE69 158 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 FOXJ1Q92949 421 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 GLYATL1Q969I3 302 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CXorf40BQ96DE9 158 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 VMP1Q96GC9 406 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 SH3YL1Q96HL8 342 aaPredicted RBP16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PKP4Q99569 1192 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 CCM2Q9BSQ5 444 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 GABARAPL3Q9BY60 117 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 BTBD1Q9H0C5 482 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 KIF17Q9P2E2 1029 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 FAM8A1Q9UBU6 413 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 AASSQ9UDR5 926 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 DGKBQ9Y6T7 804 aa16.7■□□□□ 0.26
FAM3A-222ENST00000621967 PRR23AA6NEV1 266 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 K7ESF4 209 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 RNASET2O00584 256 aaKnown RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 MT-ND2P03891 347 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 HNRNPCP07910 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 EFNA1P20827 205 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 TIA1P31483 386 aaKnown RBP eCLIP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 MAP2K4P45985 399 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 PNLIPRP1P54315 467 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 TAS2R38P59533 333 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 HKDC1Q2TB90 917 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 PROX2Q3B8N5 592 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF658BQ4V348 819 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 SLCO4C1Q6ZQN7 724 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 IGFN1Q86VF2 1251 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 SVOPQ8N4V2 548 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 SNRNP27Q8WVK2 155 aaKnown RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 FAM131CQ96AQ9 280 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF300Q96RE9 604 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 COL25A1Q9BXS0 654 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF282Q9UDV7 671 aaPredicted RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 ATP6V1HQ9UI12 483 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 EXO1Q9UQ84 846 aaKnown RBP16.69■□□□□ 0.26
FAM3A-222ENST00000621967 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
FAM3A-222ENST00000621967 RGS10O43665 173 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 WBP4O75554 376 aaKnown RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 GCM2O75603 506 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 IDUAP35475 653 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms