RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZNF595Q8IYB9 648 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 SHISA5Q8N114 240 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 KIF2BQ8N4N8 673 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 TBC1D19Q8N5T2 526 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 SLCO2A1Q92959 643 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 TSLPQ969D9 159 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 KIAA1191Q96A73 305 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 TMEM41AQ96HV5 264 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 ALS2CR12Q96Q35 445 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 PKP4Q99569 1192 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 YIPF2Q9BWQ6 316 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 RBM24Q9BX46 236 aaKnown RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 DEFB127Q9H1M4 99 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 NT5DC2Q9H857 520 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 ZFP64Q9NPA5 681 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 TREX1Q9NSU2 369 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 CATSPERZQ9NTU4 200 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 INTS10Q9NVR2 710 aaKnown RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 ANKRD10Q9NXR5 420 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 ZNF226Q9NYT6 803 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 TCAF1Q9Y4C2 921 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 A0A0G2JK05 382 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MSTNO14793 375 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PFDN6O15212 129 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 NRP2O60462 931 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 GAS8O95995 478 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 RBL1P28749 1068 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 IDUAP35475 653 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MAGEA5P43359 124 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CDK9P50750 372 aaKnown RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 HK2P52789 917 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 RAB38P57729 211 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 REEP5Q00765 189 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MESDQ14696 234 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 OCLNQ16625 522 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MINDY4Q4G0A6 757 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 FASTKD1Q53R41 847 aaKnown RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 CTSL3PQ5NE16 218 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CA13Q8N1Q1 262 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 GBP7Q8N8V2 638 aaPredicted RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 GSDMBQ8TAX9 411 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ZNF480Q8WV37 535 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ASB11Q8WXH4 323 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ANKRD7Q92527 254 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 C19orf24Q9BVV8 132 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 UBQLN3Q9H347 655 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TUBA8Q9NY65 449 aaPredicted RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 KCMF1Q9P0J7 381 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 HCN3Q9P1Z3 774 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ZFATQ9P243 1243 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CLCF1Q9UBD9 225 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 NAALAD2Q9Y3Q0 740 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 FN1P02751 2386 aaKnown RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TRIM64BA6NI03 449 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ELOA3DA6NLF2 546 aaPredicted RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 SMTNL1A8MU46 457 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SLCO1B7G3V0H7 640 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SGK494L7N484 410 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CHST10O43529 356 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 RDH16O75452 317 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 OR6B1O95007 311 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 C1QAP02745 245 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 P04436 131 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PRSS56P0CW18 603 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ALOX12P18054 663 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 HPDP32754 393 aaPredicted RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 GMPRP36959 345 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 FDFT1P37268 417 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MTTPP55157 894 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PSPHP78330 225 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 RPP38P78345 283 aaKnown RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 VLDLRP98155 873 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 HSPA14Q0VDF9 509 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SERTAD2Q14140 314 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SEMA3AQ14563 771 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TTLL9Q3SXZ7 439 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 ELOA3BQ3SY89 546 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CCSMST1Q4G0I0 132 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 HSP90AA4PQ58FG1 418 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 C4orf22Q6V702 233 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SSX8Q7RTT4 187 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 MDGA2Q7Z553 956 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 LMNTD2Q8IXW0 634 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNCA-213ENST00000618500 ELOA3Q8NG57 546 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SGMS2Q8NHU3 365 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 LPGAT1Q92604 370 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PWWP2AQ96N64 755 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 BIRC8Q96P09 236 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 QRFPRQ96P65 431 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 PROK2Q9HC23 129 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 CCDC177Q9NQR7 707 aaPredicted RBP4.21□□□□□ -1.74
SNCA-213ENST00000618500 NECTIN3Q9NQS3 549 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNCA-213ENST00000618500 GALNT8Q9NY28 637 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TAC3Q9UHF0 121 aa4.21□□□□□ -1.74
SNCA-213ENST00000618500 TSR3Q9UJK0 312 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms