RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF768Q9H5H4 540 aaKnown RBP10.87□□□□□ -0.67
SLIRP-212ENST00000613856 POLR1BQ9H9Y6 1135 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 PRM3Q9NNZ6 103 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 PDE7BQ9NP56 450 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 ARL8BQ9NVJ2 186 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
SLIRP-212ENST00000613856 IGHV5-51A0A0C4DH38 117 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 A0A1W2PQM1 296 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 URADA6NGE7 173 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 H0YGG7 62 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 NTN3O00634 580 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TXNDC9O14530 226 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TERTO14746 1132 aaKnown RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ZSCAN9O15535 394 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 P2RX6O15547 441 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 MAP3K7O43318 606 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 SRPX2O60687 465 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 PRAMEF10O60809 474 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 HNRNPCL1O60812 293 aaKnown RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ATP5HO75947 161 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 KIAA0754O94854 1291 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 CALB2P22676 271 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 BSGP35613 385 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ASMTP46597 345 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 UCNP55089 124 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 CLDN8P56748 225 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ARF3P61204 181 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 CCL7P80098 99 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF763Q0D2J5 394 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 CLN3Q13286 438 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 RCAN2Q14206 197 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 PTGR1Q14914 329 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TOR1AIP1Q5JTV8 583 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 FRMPD2BQ6IN97 320 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TRIM40Q6P9F5 258 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 ABHD17CQ6PCB6 329 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 UBE3DQ7Z6J8 389 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 D2HGDHQ8N465 521 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 GLB1L3Q8NCI6 653 aaPredicted RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 WDR48Q8TAF3 677 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 PROKR1Q8TCW9 393 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 STARD8Q92502 1023 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 NSL1Q96IY1 281 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 KCNC2Q96PR1 638 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TBCDQ9BTW9 1192 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 NLNQ9BYT8 704 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 DDX31Q9H8H2 851 aaKnown RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 FAM60AQ9NP50 221 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 MYNNQ9NPC7 610 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 LHX9Q9NQ69 397 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TXLNGQ9NUQ3 528 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 SOHLH2Q9NX45 425 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TMEM9Q9P0T7 183 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 TAGLN3Q9UI15 199 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 PLCL2Q9UPR0 1127 aa10.86□□□□□ -0.67
SLIRP-212ENST00000613856 WBP11Q9Y2W2 641 aaKnown RBP10.86□□□□□ -0.67
SLIRP-212ENST00000613856 LOC105369274A0A096LPK9 316 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 A0A0A6YYD5 115 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 LOC102723532A0A0G2JNH3 316 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 DYTNA2CJ06 578 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 FAM234BA2RU67 622 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ERICH4A6NGS2 130 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 BBIP1A8MTZ0 92 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 C4orf51C9J302 202 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ERI3O43414 337 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SH3BGRLO75368 114 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SLC22A3O75751 556 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 RASSF9O75901 435 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 UNC5CO95185 931 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 CBX6O95503 412 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SERPIND1P05546 499 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ANXA4P09525 319 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SMIM10L1P0DMW3 83 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 T-ENOLP0DO92 83 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 THRAP10827 490 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 COX4I1P13073 169 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 NELFEP18615 380 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TACR1P25103 407 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TPP2P29144 1249 aaPredicted RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ZFP36L2P47974 494 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 UFM1P61960 85 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TRA2BP62995 288 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 HSD11B2P80365 405 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 E2F1Q01094 437 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ISXQ2M1V0 245 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 PRTGQ2VWP7 1150 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 AGKQ53H12 422 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TMEM214Q6NUQ4 689 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 PAOXQ6QHF9 649 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 GK5Q6ZS86 529 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 USP53Q70EK8 1073 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 IKBIPQ70UQ0 350 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 FUNDC1Q8IVP5 155 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 OR4N4Q8N0Y3 316 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ZCCHC7Q8N3Z6 543 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms