RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MLC1Q15049 377 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 MPEG1Q2M385 716 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CRB2Q5IJ48 1285 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 C6orf141Q5SZD1 244 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 IER5LQ5T953 404 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3GQ6DHY5 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3CQ6IPX1 549 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ANGPTL8Q6UXH0 198 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 WASH2PQ6VEQ5 465 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TBC1D3Q8IZP1 549 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 HS3ST5Q8IZT8 346 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 LINC01555Q8NAE3 123 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 OR2A1Q8NGT9 310 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 FBLIM1Q8WUP2 373 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF566Q969W8 418 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CIDECQ96AQ7 238 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 MAGED4Q96JG8 741 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 F2RL3Q96RI0 385 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ACSS1Q9NUB1 689 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 IMP3Q9NV31 184 aaKnown RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 RAPGEFL1Q9UHV5 662 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ANGPT4Q9Y264 503 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ZNF451Q9Y4E5 1061 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 PCDHGA8Q9Y5G5 932 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 U3KQV3 271 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 C5orf42Q9H799 3197 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 A8MVJ9 347 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 hCG_2039718K7EN88 272 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 BCKDKO14874 412 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 PDPK1O15530 556 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 GUCY1B2O75343 617 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TRMUO75648 421 aaKnown RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CPNE6O95741 557 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 C1QCP02747 245 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ARAFP10398 606 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ETFAP13804 333 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ETS2P15036 469 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 SHMT2P34897 504 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 AHRP35869 848 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CXCR4P61073 352 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ISL1P61371 349 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 EEF1A2Q05639 463 aaKnown RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 SLC5A12Q1EHB4 618 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 IQCCQ4KMZ1 466 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 IFI44LQ53G44 452 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 CHDHQ8NE62 594 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 OR10Q1Q8NGQ4 319 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 PSMA8Q8TAA3 256 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 KLK6Q92876 244 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 NEURL3Q96EH8 262 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ZBED6CLQ96FA7 236 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 SIPA1Q96FS4 1042 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 APOL4Q9BPW4 351 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 C8orf33Q9H7E9 229 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-206ENST00000609853 KIR3DX1Q9H7L2 352 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 THSD1Q9NS62 852 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ZSCAN32Q9NX65 697 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 VNN3Q9NY84 501 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 TMEM9Q9P0T7 183 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 KCNK6Q9Y257 313 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 GPSM3Q9Y4H4 160 aa11.4□□□□□ -0.58
USP6NL-206ENST00000609853 ATG2BQ96BY7 2078 aa11.4□□□□□ -0.59
USP6NL-206ENST00000609853 PDZK1P1A8MUH7 402 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 M0QX08 132 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 ADAM23O75077 832 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 GCM2O75603 506 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 KLF8O95600 359 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 PRKACGP22612 351 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 EEF1B2P24534 225 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 PIGAP37287 484 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 CRYBA2P53672 197 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 MANFP55145 182 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 PCBP3P57721 371 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 MLLT1Q03111 559 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 CLCA4Q14CN2 919 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 COX20Q5RI15 118 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 OR4C11Q6IEV9 310 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 DUS1LQ6P1R4 473 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 FAHD1Q6P587 224 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 KCTD8Q6ZWB6 473 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 CEP68Q76N32 757 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 CYP4Z1Q86W10 505 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 RNF130Q86XS8 419 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 ADGRF3Q8IZF5 1079 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 SRFBP1Q8NEF9 429 aaKnown RBP11.39□□□□□ -0.59
USP6NL-206ENST00000609853 CREB3L4Q8TEY5 395 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 MAL2Q969L2 176 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 PDXPQ96GD0 296 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 OR2M4Q96R27 311 aa11.39□□□□□ -0.59
USP6NL-206ENST00000609853 FAIM2Q9BWQ8 316 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms