RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PEX11GQ96HA9 241 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
COMMD3-215ENST00000602574 RHOVQ96L33 236 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 LRR1Q96L50 414 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 C3orf30Q96M34 536 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 COQ10AQ96MF6 247 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 RTP3Q9BQQ7 232 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 C11orf54Q9H0W9 315 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-215ENST00000602574 IKZF4Q9H2S9 585 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 C12orf49Q9H741 205 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 PDE7BQ9NP56 450 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 HCN3Q9P1Z3 774 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 CLEC2DQ9UHP7 191 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 ING1Q9UK53 422 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-215ENST00000602574 TPRKBQ9Y3C4 175 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
COMMD3-215ENST00000602574 OR2A25A4D2G3 310 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 TCAF2A6NFQ2 919 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 M0QYT0 321 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 TPP1O14773 563 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 PGRMC2O15173 223 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 MID1O15344 667 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 INSIG1O15503 277 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 CFLARO15519 480 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 AIREO43918 545 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 RFPL1O75677 317 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 FGF3P11487 239 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 AKR1A1P14550 325 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 ICAM3P32942 547 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 AHRP35869 848 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 SRP9P49458 86 aaKnown RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 RAB5CP51148 216 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 CYP2J2P51589 502 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 FCGRTP55899 365 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 LSM3P62310 102 aaKnown RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 VAMP2P63027 116 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 HTD2P86397 168 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 DHODHQ02127 395 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 FPGSQ05932 587 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 POU4F2Q12837 409 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 TRAM1Q15629 374 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 KCNA10Q16322 511 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 C9orf64Q5T6V5 341 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 C8orf82Q6P1X6 216 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 C3P1Q6ZMU1 363 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 CDHR3Q6ZTQ4 885 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 MFSD9Q8NBP5 474 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 STK35Q8TDR2 534 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 LINGO1Q96FE5 620 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 MED8Q96G25 268 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 YIPF4Q9BSR8 244 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 MCOLN1Q9GZU1 580 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 ZBTB26Q9HCK0 441 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 RNF146Q9NTX7 359 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 RBFOX1Q9NWB1 397 aaKnown RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 MAGEL2Q9UJ55 1249 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 TCFL5Q9UL49 500 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 C19orf53Q9UNZ5 99 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-215ENST00000602574 PADI2Q9Y2J8 665 aa8.53□□□□□ -1.04
COMMD3-215ENST00000602574 PTGES3LE9PB15 166 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 UBE2Q2LH0YL09 131 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 QSOX1O00391 747 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 LPLP06858 475 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 FAM157BP0CG42 384 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 FCER1AP12319 257 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 AHCYP23526 432 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 CTSKP43235 329 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 MAP2K3P46734 347 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 GMPSP49915 693 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 CDKN1CP49918 316 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF81P51508 661 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 YWHAZP63104 245 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 LSM11P83369 360 aaKnown RBP eCLIP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 MC2RQ01718 297 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 SLC10A2Q12908 348 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 KLF1Q13351 362 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 DAG1Q14118 895 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 LAPTM4AQ15012 233 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 RBMS2Q15434 407 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 OR8G1Q15617 311 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 HIF1AQ16665 826 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 BSPRYQ5W0U4 402 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 SLC16A14Q7RTX9 510 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 PEG10Q86TG7 708 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 SLC26A11Q86WA9 606 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 RNF130Q86XS8 419 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 CMTR2Q8IYT2 770 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 GPR137CQ8N3F9 429 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 OR4K15Q8NH41 348 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 DNAJB8Q8NHS0 232 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms