RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TMEM184CQ9NVA4 438 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 C5AR2Q9P296 337 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 RAPGEFL1Q9UHV5 662 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 HS3ST3A1Q9Y663 406 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 A0A1B0GTW7 788 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 A0A1W2PRB8 838 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ISM1B1AKI9 464 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 C4orf51C9J302 202 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 BTN3A3O00478 584 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 MAP3K13O43283 966 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 IGLV3-19P01714 112 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 PPIBP23284 216 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 CRYBA2P53672 197 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ABATP80404 500 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 VAC14Q08AM6 782 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 MERTKQ12866 999 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 PPP1R8Q12972 351 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ZIC1Q15915 447 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 RNF220Q5VTB9 566 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ANGPTL8Q6UXH0 198 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ABI3BPQ7Z7G0 1075 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 NUDT13Q86X67 352 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 HS3ST5Q8IZT8 346 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 EID3Q8N140 333 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 C17orf62Q9BQA9 187 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 TCEAL2Q9H3H9 227 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 C8orf4Q9NR00 106 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 TEX10Q9NXF1 929 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 TAS2R9Q9NYW1 312 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ETFAP13804 333 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SHMT2P34897 504 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 CRATP43155 626 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 ALDH9A1P49189 494 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 DGKEP52429 567 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SPIDRQ14159 915 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 KIAA0895LQ68EN5 471 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 OR4C11Q6IEV9 310 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF793Q6ZN11 406 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 VTCN1Q7Z7D3 282 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 ST13P4Q8IZP2 240 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SPEM1Q8N4L4 309 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SOX17Q9H6I2 414 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 DDX31Q9H8H2 851 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SMPD3Q9NY59 655 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 OR6C2Q9NZP2 312 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 KLF15Q9UIH9 416 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SAMD4AQ9UPU9 718 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 CORO2BQ9UQ03 480 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SLCO1B1Q9Y6L6 691 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 A0A0A6YYD5 115 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 FAM86C2PA6NEL3 165 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SNAP29O95721 258 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 F3P13726 295 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 NDUFS1P28331 727 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 VEZF1Q14119 521 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC5A12Q1EHB4 618 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC36A3Q495N2 470 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF425Q6IV72 752 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 SYT13Q7L8C5 426 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 TMEM179BQ7Z7N9 219 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 STK32CQ86UX6 486 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 TTLQ8NG68 377 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 QRFPRQ96P65 431 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF696Q9H7X3 374 aa16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 TRNAU1APQ9NX07 287 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-216ENST00000598201 PRAMEF26H0Y7S4 382 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 TNFRSF21O75509 655 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 GCM2O75603 506 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 TNFAIP8O95379 198 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CLIC3O95833 236 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 AQP1P29972 269 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CMPK1P30085 196 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 GRK3P35626 688 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 MAGEA2P43356 314 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CCR5P51681 352 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 ARSFP54793 590 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CYBRD1Q53TN4 286 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 SFTPA2Q8IWL1 248 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 ZCCHC7Q8N3Z6 543 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 FAM160A2Q8N612 972 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 OR52N2Q8NGI0 321 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CYGBQ8WWM9 190 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 PATE1Q8WXA2 126 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 RLN3Q8WXF3 142 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 FBXL20Q96IG2 436 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 IER2Q9BTL4 223 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 SPATA9Q9BWV2 254 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 GPR174Q9BXC1 333 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 SRMSQ9H3Y6 488 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 CXorf36Q9H7Y0 433 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 ADAM29Q9UKF5 820 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 FAF1Q9UNN5 650 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 SNX11Q9Y5W9 270 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 AP1M2Q9Y6Q5 423 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 DGKBQ9Y6T7 804 aa16.21■□□□□ 0.19
SHKBP1-216ENST00000598201 LRP4O75096 1905 aa16.21■□□□□ 0.18
SHKBP1-216ENST00000598201 G3V2T6 193 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms