RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 PHF10Q8WUB8 498 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 NCLNQ969V3 563 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 GAL3ST3Q96A11 431 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 PDLIM5Q96HC4 596 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TMEM79Q9BSE2 394 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 SMYD2Q9NRG4 433 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 DEPPQ9NTK1 212 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 PPT2Q9UMR5 302 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 MPDZO75970 2070 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 URADA6NGE7 173 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 E9PLN8 166 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 PRRG2O14669 202 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 TP73O15350 636 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 ERI3O43414 337 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 PEX1O43933 1283 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 PRAMEF4O60810 478 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 PDE9AO76083 593 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 TFEBP19484 476 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 CERS1P27544 350 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 GMPRP36959 345 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 SLC6A12P48065 614 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 CLCN2P51788 898 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 RAB38P57729 211 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 MORF4L2Q15014 288 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 PRAMEF9Q5VWM5 478 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 FRA10AC1Q70Z53 315 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 VN1R5Q7Z5H4 357 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 ARMC10Q8N2F6 343 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 SPATA6LQ8N4H0 392 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 FBXO36Q8NEA4 188 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 OR52N2Q8NGI0 321 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 FAM57AQ8TBR7 257 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 ESAMQ96AP7 390 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 RHBDF1Q96CC6 855 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 VKORC1Q9BQB6 163 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 TRIM31Q9BZY9 425 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 CAB39LQ9H9S4 337 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 KCMF1Q9P0J7 381 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 KLF13Q9Y2Y9 288 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 MMACHCQ9Y4U1 282 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
SOX2-OT-228ENST00000597828 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 LRIT2A6NDA9 550 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 G3V3Y1 287 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 CES2O00748 559 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 TAPBPO15533 448 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 C1GALT1C1LP0DN25 315 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 PTGS2P35354 604 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 GPR143P51810 404 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 PLA2G16P53816 162 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 MRPS25P82663 173 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 CDKL1Q00532 357 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 TLE4Q04727 773 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 MGAT5Q09328 741 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 PDIA2Q13087 525 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 SLC13A2Q13183 592 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 MEX3BQ6ZN04 569 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 KLHDC8AQ8IYD2 350 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 C17orf53Q8N3J3 647 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 NKAPQ8N5F7 415 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 TMEM156Q8N614 296 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 ZNF321PQ8N8H1 164 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 POGLUT1Q8NBL1 392 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 C16orf52Q8NHV5 167 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 CA5BP1Q8WTZ4 195 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 VMP1Q96GC9 406 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 VPS39Q96JC1 886 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 LIPGQ9Y5X9 500 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 MED12Q93074 2177 aa11.26□□□□□ -0.61
SOX2-OT-228ENST00000597828 FAM166BA8MTA8 275 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 PHGDHO43175 533 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 ZNF354AO60765 605 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 OR2J2O76002 312 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 SEC31AO94979 1220 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 OR6B1O95007 311 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 WISP3O95389 354 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 TUBB4AP04350 444 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 TCP1P17987 556 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 GNAZP19086 355 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 CD22P20273 847 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 SSTR2P30874 369 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 CASQ1P31415 396 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 SOX3P41225 446 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 HSPA7P48741 367 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 SSR4P51571 173 aa11.25□□□□□ -0.61
SOX2-OT-228ENST00000597828 ARL4CP56559 192 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms