RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ANKDD1BA6NHY2 528 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 FAM166BA8MTA8 275 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 NPIPA2E9PIF3 369 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 NPIPA3F8WFD2 350 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ACOT7O00154 380 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 CDC7O00311 574 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ERI3O43414 337 aaKnown RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 B3GALT2O43825 422 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PRKNO60260 465 aaPredicted RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 WDR47O94967 919 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 TUBB4AP04350 444 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 IFNA16P05015 189 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF10P21506 573 aaPredicted RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PPP2R1BP30154 601 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 CHRNB4P30926 498 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ELK3P41970 407 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 HSD17B7P56937 341 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PPIAP62937 165 aaKnown RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PMPCAQ10713 525 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 BMPR2Q13873 1038 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 TERF2Q15554 542 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 TESK1Q15569 626 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 C16orf47Q6ZP98 133 aaPredicted RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 FRA10AC1Q70Z53 315 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 KLHDC8AQ8IYD2 350 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PDIK1LQ8N165 341 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 NKAPQ8N5F7 415 aaKnown RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ACBD4Q8NC06 268 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PSD4Q8NDX1 1056 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 TTLQ8NG68 377 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 OR5M3Q8NGP4 307 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 OR10Q1Q8NGQ4 319 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 LILRB4Q8NHJ6 448 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ACTRT1Q8TDG2 376 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ASB15Q8WXK1 588 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 GAL3ST3Q96A11 431 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 OSBPL9Q96SU4 736 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 NPLQ9BXD5 320 aaPredicted RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 AICDAQ9GZX7 198 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF223Q9UK11 482 aaPredicted RBP9.83□□□□□ -0.84
CHMP2A-202ENST00000596708 OTOGQ6ZRI0 2925 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 MYOCOSA0A1B0GUC4 107 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 FAM95CA0A1B0GW59 222 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 WWP2O00308 870 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 OR2J2O76002 312 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF37AP17032 561 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 GNAZP19086 355 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TNNI3P19429 210 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 GDF5P43026 501 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 HNMTP50135 292 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 GPR143P51810 404 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 NR0B1P51843 470 aaKnown RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 HNRNPFP52597 415 aaKnown RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 PLA2G16P53816 162 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 NUP107P57740 925 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CCZ1BP86790 482 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CCZ1P86791 482 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 SLBPQ14493 270 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 PPP1R3AQ16821 1122 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF750Q32MQ0 723 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 C18orf21Q32NC0 220 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 GXYLT1Q4G148 440 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CES4AQ5XG92 561 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TRIM40Q6P9F5 258 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TRMT10BQ6PF06 316 aaKnown RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TMIGD1Q6UXZ0 262 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 SPNS3Q6ZMD2 512 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ACAD11Q709F0 780 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CLNKQ7Z7G1 428 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TMEM200AQ86VY9 491 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CCDC71Q8IV32 467 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 SCUBE1Q8IWY4 988 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF595Q8IYB9 648 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 KRT78Q8N1N4 520 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TMEM132CQ8N3T6 1108 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 RPRMLQ8N4K4 120 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 FAM47BQ8NA70 645 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TMEM52Q8NDY8 209 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 OR5M9Q8NGP3 310 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 MS4A6EQ96DS6 147 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 TREX2Q9BQ50 279 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ZNF559Q9BR84 538 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 DDX47Q9H0S4 455 aaKnown RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 COPS7BQ9H9Q2 264 aaPredicted RBP9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 ADAP2Q9NPF8 381 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 DEPPQ9NTK1 212 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CTNNAL1Q9UBT7 734 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 OARD1Q9Y530 152 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 CLCA3PQ9Y6N3 262 aa9.82□□□□□ -0.84
CHMP2A-202ENST00000596708 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
CHMP2A-202ENST00000596708 PINLYPA6NC86 204 aa9.81□□□□□ -0.84
CHMP2A-202ENST00000596708 LRIT2A6NDA9 550 aa9.81□□□□□ -0.84
CHMP2A-202ENST00000596708 NCF1BA6NI72 391 aaPredicted RBP9.81□□□□□ -0.84
CHMP2A-202ENST00000596708 NCF1CA8MVU1 366 aaPredicted RBP9.81□□□□□ -0.84
CHMP2A-202ENST00000596708 G3V3Y1 287 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms