RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZYG11AQ6WRX3 759 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 QSOX2Q6ZRP7 698 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 TEX19Q8NA77 164 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 C7orf57Q8NEG2 295 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 OR4F6Q8NGB9 312 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 WDR20Q8TBZ3 569 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 TRPC4APQ8TEL6 797 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 TM9SF4Q92544 642 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 L3HYPDHQ96EM0 354 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 PTCHD1Q96NR3 888 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 NSUN5Q96P11 429 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 FRG2BQ96QU4 278 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 SMAD5Q99717 465 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 ELOVL6Q9H5J4 265 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 DMRT3Q9NQL9 472 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 PRDM7Q9NQW5 492 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 ANAPC2Q9UJX6 822 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 PPT2Q9UMR5 302 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 MMACHCQ9Y4U1 282 aa16.28■□□□□ 0.2
SHKBP1-212ENST00000596163 BLACEA4D250 179 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 PLIN3O60664 434 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 DPM1O60762 260 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 DNAJB6O75190 326 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 CDC123O75794 336 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 C1QL1O75973 258 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 PROCP04070 461 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 SERPINA7P05543 415 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 SSR2P43308 183 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 RPS13P62277 151 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 ABRAXAS2Q15018 415 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 AGAP7PQ5VUJ5 663 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 RIPOR1Q6ZS17 1223 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 ANKRD37Q7Z713 158 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 TRABD2AQ86V40 505 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 ZNF595Q8IYB9 648 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 C4orf33Q8N1A6 199 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 ACOT4Q8N9L9 421 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 THOC3Q96J01 351 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 AGAP4Q96P64 663 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 NUDT9Q9BW91 350 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 RBCK1Q9BYM8 510 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 OR51B5Q9H339 312 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 LYRM4Q9HD34 91 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 PRDM9Q9NQV7 894 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 NMRK1Q9NWW6 199 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 MKS1Q9NXB0 559 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 AHSPQ9NZD4 102 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 TRPS1Q9UHF7 1281 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
SHKBP1-212ENST00000596163 CCDC151A5D8V7 595 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 G3V2L1 256 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 H3BQF6 201 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 SH3BGRLO75368 114 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 CPA3P15088 417 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 HIST1H1TP22492 207 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 ATP5A1P25705 553 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 CERS1P27544 350 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 LIM2P55344 173 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 PKNOX1P55347 436 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 HSD17B7P56937 341 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 OR4D2P58180 307 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 DNAJB13P59910 316 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 ASPHQ12797 758 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 RAPSNQ13702 412 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 PCOLCEQ15113 449 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 EXT1Q16394 746 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 CFAP157Q5JU67 520 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 JMJD6Q6NYC1 403 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 UBE3DQ7Z6J8 389 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF605Q86T29 641 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 PTRH1Q86Y79 214 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 SRRM1Q8IYB3 904 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 CCNYL1Q8N7R7 359 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 MTFMTQ96DP5 389 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 APOPT1Q96IL0 206 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 TMEM237Q96Q45 408 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 SMC6Q96SB8 1091 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 LPAR4Q99677 370 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF552Q9H707 407 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 MS4A12Q9NXJ0 267 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 DAPP1Q9UN19 280 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 PIEZO2Q9H5I5 2752 aa16.26■□□□□ 0.19
SHKBP1-212ENST00000596163 FAM227AF5H4B4 570 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 SCELO95171 688 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 KRT6AP02538 564 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 KRT6BP04259 564 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 UQCRHP07919 91 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 KRT6CP48668 564 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 NEK2P51955 445 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 LCP2Q13094 533 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms