RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZNF700Q9H0M5 742 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 KCMF1Q9P0J7 381 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 DCDC2Q9UHG0 476 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 LGALS13Q9UHV8 139 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CLDN16Q9Y5I7 305 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 CSAG2Q9Y5P2 127 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 TENM4Q6N022 2769 aa10.84□□□□□ -0.67
VMP1-211ENST00000591315 NSG1A0A0A6YYJ2 146 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 WASHC1A8K0Z3 465 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 A8MUA0 341 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 B8ZZF3 427 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PLPP1O14494 284 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 COPEO14579 308 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 B3GALT2O43825 422 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PRKRAO75569 313 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 ITGAMP11215 1152 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SFTPCP11686 197 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 TAC1P20366 129 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 IMPDH1P20839 514 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 GSTM2P28161 218 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 LIM2P55344 173 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 ZNF844Q08AG5 666 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 C19orf57Q0VDD7 668 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 AIMP2Q13155 320 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 MYBPC3Q14896 1274 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 NSDHLQ15738 373 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SFT2D3Q587I9 215 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 METTL2BQ6P1Q9 378 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 TRIM40Q6P9F5 258 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 CPEB2Q7Z5Q1 589 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 MILR1Q7Z6M3 343 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SRRM1Q8IYB3 904 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 SIRT6Q8N6T7 355 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 CCNYL1Q8N7R7 359 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 RBMXL3Q8N7X1 1067 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 ACOT4Q8N9L9 421 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PLPP5Q8NEB5 264 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 METTL21AQ8WXB1 218 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PSMF1Q92530 271 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 UCN3Q969E3 161 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 UBE2E3Q969T4 207 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 CMTM7Q96FZ5 175 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SEC16BQ96JE7 1060 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 IMMP1LQ96LU5 166 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PTCHD1Q96NR3 888 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 OR1F2PQ96R84 312 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 KCNA7Q96RP8 456 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SERINC2Q96SA4 455 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 NTMT1Q9BV86 223 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 ZNF717Q9BY31 904 aaPredicted RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 TRIM4Q9C037 500 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 GSTO2Q9H4Y5 243 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PPCSQ9HAB8 311 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 TNFRSF12AQ9NP84 129 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 RRAGDQ9NQL2 400 aaPredicted RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 SLC17A7Q9P2U7 560 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 PCDHGA9Q9Y5G4 932 aaKnown RBP10.83□□□□□ -0.68
VMP1-211ENST00000591315 PCDHGA11Q9Y5H2 935 aa10.83□□□□□ -0.68
VMP1-211ENST00000591315 SVILO95425 2214 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 FLNCQ14315 2725 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 BAHCC1Q9P281 2608 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 A0A1W2PQ72 361 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 ARHGAP10A1A4S6 786 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 CYR61O00622 381 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 UBFD1O14562 309 aaKnown RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 TMPRSS11DO60235 418 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 PRMT3O60678 531 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 UGDHO60701 494 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 GBAP04062 536 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 PRR35P0CG20 571 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 MYL2P10916 166 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 CHN1P15882 459 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 HIST1H1TP22492 207 aaPredicted RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 PIK3CBP42338 1070 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 HTR6P50406 440 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 MTTPP55157 894 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 SOX8P57073 446 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 RAB38P57729 211 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 ID2Q02363 134 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 FRG2Q64ET8 278 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 B3GNTL1Q67FW5 361 aaPredicted RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 FCRLBQ6BAA4 426 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 OR4C11Q6IEV9 310 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 SCIMPQ6UWF3 145 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 LINC00696Q6ZRV3 163 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 PRICKLE2Q7Z3G6 844 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 LCA5Q86VQ0 697 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 C10orf107Q8IVU9 208 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 IQCKQ8N0W5 287 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 CDYL2Q8N8U2 506 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 BANPQ8N9N5 519 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 ARMC2Q8NEN0 867 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 BRIX1Q8TDN6 353 aaKnown RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 PPP4R1Q8TF05 950 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 SREK1Q8WXA9 508 aaKnown RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 NACC2Q96BF6 587 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 L3HYPDHQ96EM0 354 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 MAGEB10Q96LZ2 347 aaPredicted RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 ZIM3Q96PE6 472 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms