RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NUDT13Q86X67 352 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 METTL4Q8N3J2 472 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ZCCHC7Q8N3Z6 543 aaKnown RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 AMER3Q8N944 861 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ACOT4Q8N9L9 421 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ZSCAN1Q8NBB4 408 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 MIEF2Q96C03 454 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 MAGEB18Q96M61 343 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 OR1F2PQ96R84 312 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 UBL7Q96S82 380 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 DDX31Q9H8H2 851 aaKnown RBP18.52■□□□□ 0.56
CIRBP-220ENST00000588917 TNFRSF12AQ9NP84 129 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 SLC22A11Q9NSA0 550 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 MS4A12Q9NXJ0 267 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 FIS1Q9Y3D6 152 aa18.52■□□□□ 0.56
CIRBP-220ENST00000588917 ARHGAP10A1A4S6 786 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 VSTM2BA6NLU5 285 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 PSMD12O00232 456 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-220ENST00000588917 PLPP1O14494 284 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 TERTO14746 1132 aaKnown RBP18.51■□□□□ 0.55
CIRBP-220ENST00000588917 CHST10O43529 356 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 RDH16O75452 317 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 LYPLA1O75608 230 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-220ENST00000588917 ETHE1O95571 254 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 ARRB2P32121 409 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 HK2P52789 917 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 SLC9A5Q14940 896 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 NKG7Q16617 165 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 UGT3A2Q3SY77 523 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 SPIN4Q56A73 249 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 SPDYAQ5MJ70 313 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 CES4AQ5XG92 561 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 CYP20A1Q6UW02 462 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 FAM198BQ6UWH4 519 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 MED25Q71SY5 747 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 COX15Q7KZN9 410 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 ENDOVQ8N8Q3 282 aaKnown RBP18.51■□□□□ 0.55
CIRBP-220ENST00000588917 C7orf57Q8NEG2 295 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 STT3BQ8TCJ2 826 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 AGR3Q8TD06 166 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 TWIST2Q8WVJ9 160 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 CKAP2Q8WWK9 683 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 NACC2Q96BF6 587 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 C20orf27Q9GZN8 174 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 LYRM4Q9HD34 91 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 TCFL5Q9UL49 500 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 SSUH2Q9Y2M2 353 aa18.51■□□□□ 0.55
CIRBP-220ENST00000588917 A0A0G2JN53 185 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 GUCY1B2O75343 617 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 RSL1D1O76021 490 aaKnown RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 IGHEP01854 428 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 CYC1P08574 325 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ZGLP1P0C6A0 271 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 RNH1P13489 461 aaKnown RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 LIFP15018 202 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 JAK1P23458 1154 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 BSGP35613 385 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 XCR1P46094 333 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 HTR6P50406 440 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ACSM2AQ08AH3 577 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 SLAMF1Q13291 335 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ACSM2BQ68CK6 577 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 CRLF3Q8IUI8 442 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 DDIASQ8IXT1 998 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 DTWD1Q8N5C7 304 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF781Q8N8C0 355 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 OR2Y1Q8NGV0 311 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 CHTF18Q8WVB6 975 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 TBC1D20Q96BZ9 403 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 SLC45A3Q96JT2 553 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 HBEGFQ99075 208 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 SORT1Q99523 831 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ACPTQ9BZG2 426 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 PRORYQ9H606 182 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF395Q9H8N7 513 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 LYARQ9NX58 379 aaKnown RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 HCN3Q9P1Z3 774 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 VTI1BQ9UEU0 232 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 PHF11Q9UIL8 331 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 DAPP1Q9UN19 280 aa18.5■□□□□ 0.55
CIRBP-220ENST00000588917 MRPS33Q9Y291 106 aaKnown RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 GCN1Q92616 2671 aaKnown RBP18.5■□□□□ 0.55
CIRBP-220ENST00000588917 BLACEA4D250 179 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF860A6NHJ4 632 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 C4orf51C9J302 202 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 NPIPB8E9PQR5 432 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 RTCAO00442 366 aaKnown RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 PCDH17O14917 1159 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 KLF7O75840 302 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 MYO1DO94832 1006 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 BMP10O95393 424 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 B3GALT4O96024 378 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 PRPH2P23942 346 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 TLX1P31314 330 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 FOLR3P41439 243 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 TBL3Q12788 808 aaKnown RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 RUNX2Q13950 521 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 SSPNQ14714 243 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 CRTC2Q53ET0 693 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms