RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM129BQ96TA1 746 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TAS2R9Q9NYW1 312 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ENOPH1Q9UHY7 261 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC6A14Q9UN76 642 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PEX16Q9Y5Y5 336 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DOCK6Q96HP0 2047 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SH3D21A4FU49 640 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KCNK2O95069 426 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LRG1P02750 347 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HSMCR30P0CW71 290 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 POU2F1P14859 743 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CDC42P60953 191 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FBXO15Q8NCQ5 510 aaPredicted RBP13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF689Q96CS4 500 aaPredicted RBP13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 EFCAB11Q9BUY7 163 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MYNNQ9NPC7 610 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DMRT3Q9NQL9 472 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CNOT2Q9NZN8 540 aaKnown RBP13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GULP1Q9UBP9 304 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SH2B3Q9UQQ2 575 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TSPAN11A1L157 253 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 EFCAB10A6NFE3 127 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HAT1O14929 419 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KLHL18O94889 574 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GADD45GO95257 159 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 C1orf105O95561 183 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 POLR2EP19388 210 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GTF2E2P29084 291 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CHI3L1P36222 383 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ETV6P41212 452 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 C2orf80Q0P641 193 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLBPQ14493 270 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 BCL2A1Q16548 175 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ARSIQ5FYB1 569 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FAM71E1Q6IPT2 247 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SYTL1Q8IYJ3 562 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OR5AK3PQ8NH89 298 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GTPBP3Q969Y2 492 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 Q96MT0 163 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 WRAP53Q9BUR4 548 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ENPP4Q9Y6X5 453 aa13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MN1Q10571 1320 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ARRDC5A6NEK1 342 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZAR1LA6NP61 321 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 H3BM21 787 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SAP18O00422 153 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MPZL2O60487 215 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LILRB3O75022 631 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCNB2O95067 398 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MED26O95402 600 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DLGAP3O95886 979 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TGFB1P01137 390 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ADRA2AP08913 450 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ARAFP10398 606 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RHCEP18577 417 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZNF658BQ4V348 819 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 WDR48Q8TAF3 677 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OR51B5Q9H339 312 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FTSJ1Q9UET6 329 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MKLN1Q9UL63 735 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PIPSLA2A3N6 862 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SNPHO15079 494 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZW10O43264 779 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SNX4O95219 450 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 C1GALT1C1LP0DN25 315 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAS2R50P59544 299 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GANABQ14697 944 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ATAD3BQ5T9A4 648 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DPPA4Q7L190 304 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ATCAYQ86WG3 371 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HEATR4Q86WZ0 1026 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 METTL4Q8N3J2 472 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MGLLQ99685 303 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SGPP1Q9BX95 441 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ANGPT4Q9Y264 503 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ATP11BQ9Y2G3 1177 aa13.57□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TRBC2A0A5B9 178 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KIAA0513O60268 411 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KRT75O95678 551 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RECKO95980 971 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms