RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CPSF2Q9P2I0 782 aaKnown RBP18.3■□□□□ 0.52
SREBF1-220ENST00000581707 ZNF180Q9UJW8 692 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 MMACHCQ9Y4U1 282 aa18.3■□□□□ 0.52
SREBF1-220ENST00000581707 IGKV3D-11A0A0A0MRZ8 115 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 TCRBV16S1A1N1A0A5B0 115 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 CBX6O95503 412 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 PCNAP12004 261 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 MTTPP55157 894 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 RAB38P57729 211 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 SLC26A5P58743 744 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 TECRLQ5HYJ1 363 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 FHL5Q5TD97 284 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 RPUSD3Q6P087 351 aaKnown RBP18.29■□□□□ 0.52
SREBF1-220ENST00000581707 LAS2Q8IYD9 372 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 SRFBP1Q8NEF9 429 aaKnown RBP18.29■□□□□ 0.52
SREBF1-220ENST00000581707 OR7G3Q8NG95 312 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 GRHL3Q8TE85 626 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 MS4A8Q9BY19 250 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 PRDM7Q9NQW5 492 aa18.29■□□□□ 0.52
SREBF1-220ENST00000581707 TNPO3Q9Y5L0 923 aaKnown RBP18.29■□□□□ 0.52
SREBF1-220ENST00000581707 EXOC1LA0A1B0GW35 172 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 LRRC14BA6NHZ5 514 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 TRIM49D1C9J1S8 452 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 CLDN4O14493 209 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 TGFB1P01137 390 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 ABHD2P08910 425 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 RBP1P09455 135 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 MYBL2P10244 700 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 COL6A2P12110 1019 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 CERS1P27544 350 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 SERPINB1P30740 379 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 PCBP2Q15366 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREBF1-220ENST00000581707 MEP1AQ16819 746 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 EIF2S3LQ2VIR3 472 aaKnown RBP18.28■□□□□ 0.52
SREBF1-220ENST00000581707 TMEM35AQ53FP2 167 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 ACER2Q5QJU3 275 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 GRHL2Q6ISB3 625 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 CHSY3Q70JA7 882 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 TRMT10CQ7L0Y3 403 aaKnown RBP18.28■□□□□ 0.52
SREBF1-220ENST00000581707 MYLK4Q86YV6 388 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-220ENST00000581707 SLC5A8Q8N695 610 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 ADAMTS18Q8TE60 1221 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 SCYL1Q96KG9 808 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 KCNC2Q96PR1 638 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 ROGDIQ9GZN7 287 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 PRTFDC1Q9NRG1 225 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 MRPS33Q9Y291 106 aaKnown RBP18.28■□□□□ 0.52
SREBF1-220ENST00000581707 HIVEP3Q5T1R4 2406 aa18.28■□□□□ 0.52
SREBF1-220ENST00000581707 SVILO95425 2214 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 USP9YO00507 2555 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-220ENST00000581707 OR5H15A6NDH6 313 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 SAGE2PA6NJ88 616 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 SIX3O95343 332 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-220ENST00000581707 SNRPAP09012 282 aaKnown RBP18.27■□□□□ 0.52
SREBF1-220ENST00000581707 PIK3CGP48736 1102 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 LIM2P55344 173 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 HSD17B7P56937 341 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 TAS2R50P59544 299 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 GTF2H2Q13888 395 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 RCN2Q14257 317 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 TSNAXIP1Q2TAA8 658 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 LGSNQ5TDP6 509 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 LIPJQ5W064 366 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 GTF2H2CQ6P1K8 395 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 METTL2BQ6P1Q9 378 aaKnown RBP18.27■□□□□ 0.52
SREBF1-220ENST00000581707 UBE3DQ7Z6J8 389 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 CRLF3Q8IUI8 442 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 BEST3Q8N1M1 668 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 FAM47BQ8NA70 645 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 SUN3Q8TAQ9 357 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 PRR7Q8TB68 274 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 ELP5Q8TE02 316 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 FAR1Q8WVX9 515 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 CMTM7Q96FZ5 175 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 TBCDQ9BTW9 1192 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 ACTR8Q9H981 624 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 ABI3Q9P2A4 366 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 ADGRE2Q9UHX3 823 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 DAPP1Q9UN19 280 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 PCDHGA11Q9Y5H2 935 aa18.27■□□□□ 0.52
SREBF1-220ENST00000581707 ANKUB1A6NFN9 424 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 A8MUA0 341 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 CYR61O00622 381 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 E2F3O00716 465 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 UGDHO60701 494 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 SH3BGRLO75368 114 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 FAM153BP0C7A2 387 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 ATP5A1P25705 553 aaKnown RBP18.26■□□□□ 0.51
SREBF1-220ENST00000581707 HNRNPFP52597 415 aaKnown RBP18.26■□□□□ 0.51
SREBF1-220ENST00000581707 SLC13A2Q13183 592 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 DDX39BQ13838 428 aaKnown RBP18.26■□□□□ 0.51
SREBF1-220ENST00000581707 FAM153CQ494X1 144 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 FAM180AQ6UWF9 173 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 GOLGA7Q7Z5G4 137 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 SCUBE1Q8IWY4 988 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 ZNF595Q8IYB9 648 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 KIF2BQ8N4N8 673 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 PTGR2Q8N8N7 351 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-220ENST00000581707 TMEM52Q8NDY8 209 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 HUS1BQ8NHY5 278 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms