RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SLC25A12O75746 678 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TBX6O95947 436 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 CRABP2P29373 138 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 SSTR1P30872 391 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 HNRNPH1P31943 449 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 PTGER4P35408 488 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 KCNC1P48547 511 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 MTTPP55157 894 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 BTG2P78543 158 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ALDH6A1Q02252 535 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF460Q14592 562 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ELAVL1Q15717 326 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TMEM35AQ53FP2 167 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF787Q6DD87 383 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 SPINK14Q6IE38 97 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ABHD17CQ6PCB6 329 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 CTAGE6Q86UF2 777 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 SPPL2CQ8IUH8 684 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 GHDCQ8N2G8 530 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 C16orf52Q8NHV5 167 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 UBTD2Q8WUN7 234 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TMEM125Q96AQ2 219 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 VMP1Q96GC9 406 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 KCNC2Q96PR1 638 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 TMEM79Q9BSE2 394 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 REXO4Q9GZR2 422 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 CDCP1Q9H5V8 836 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 NMRAL1Q9HBL8 299 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 KLF13Q9Y2Y9 288 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-213ENST00000578044 ENO4A6NNW6 628 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 C4orf51C9J302 202 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 CCL21O00585 134 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 CYR61O00622 381 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ERI3O43414 337 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ASNA1O43681 348 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 CTNSO60931 367 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 F10P00742 488 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 MAOAP21397 527 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 SAT1P21673 171 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 TPP2P29144 1249 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 STX2P32856 288 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 GDF5P43026 501 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ETF1P62495 437 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 BTN3A2P78410 334 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 OC90Q02509 493 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 PDK4Q16654 411 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 FCRLBQ6BAA4 426 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 HIST2H2AA3Q6FI13 130 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 GALNTL5Q7Z4T8 443 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ISCA2Q86U28 154 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF227Q86WZ6 799 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 LAS2Q8IYD9 372 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 TMEM132CQ8N3T6 1108 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 MORN4Q8NDC4 146 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 CCDC120Q96HB5 630 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 TBCDQ9BTW9 1192 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 RBCK1Q9BYM8 510 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 SAYSD1Q9NPB0 183 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 NECTIN3Q9NQS3 549 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 PSD3Q9NYI0 1048 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 YARS2Q9Y2Z4 477 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-213ENST00000578044 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 KLRC4-KLRK1H3BQV0 150 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 RAD51CO43502 376 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 COL8A1P27658 744 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 SMSP52788 366 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 GPX6P59796 221 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 OLR1P78380 273 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 RUNX2Q13950 521 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 SERTAD2Q14140 314 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 VN1R5Q7Z5H4 357 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 ZFP62Q8NB50 900 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 DAZLQ92904 295 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 MAGED4Q96JG8 741 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 CD244Q9BZW8 370 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 PRDM7Q9NQW5 492 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 PRTFDC1Q9NRG1 225 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 NUDT4Q9NZJ9 180 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 KCMF1Q9P0J7 381 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 PYCARDQ9ULZ3 195 aa13.53□□□□□ -0.24
SMARCE1-213ENST00000578044 CSMD1Q96PZ7 3565 aa13.52□□□□□ -0.24
SMARCE1-213ENST00000578044 SYCE1LA8MT33 242 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms