RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ABRAXAS2Q15018 415 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 UNC50Q53HI1 259 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 TCHHL1Q5QJ38 904 aaPredicted RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 ZNF678Q5SXM1 525 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 KHDRBS2Q5VWX1 349 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 LIPJQ5W064 366 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 B3GNTL1Q67FW5 361 aaPredicted RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 PLAG1Q6DJT9 500 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 TAOK1Q7L7X3 1001 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 CPEB2Q7Z5Q1 589 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 ZNF227Q86WZ6 799 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 KRT78Q8N1N4 520 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 MREGQ8N565 214 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 CLEC1AQ8NC01 280 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 APCDD1LQ8NCL9 501 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 ACMSDQ8TDX5 336 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 ELP5Q8TE02 316 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PPP4R1Q8TF05 950 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PNPLA2Q96AD5 504 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PHF21BQ96EK2 531 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 L3HYPDHQ96EM0 354 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 C11orf24Q96F05 449 aaPredicted RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 MAPKAP1Q9BPZ7 522 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 NPLQ9BXD5 320 aaPredicted RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 REXO4Q9GZR2 422 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 LHPPQ9H008 270 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 GSTO2Q9H4Y5 243 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 IPPKQ9H8X2 491 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 RIC8BQ9NVN3 520 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 LUZP4Q9P127 313 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 LGALS13Q9UHV8 139 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 RAB21Q9UL25 225 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 ZNF451Q9Y4E5 1061 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 NSG1A0A0A6YYJ2 146 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 A0A1W2PS29 197 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SAGE2PA6NJ88 616 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 TMEM200CA6NKL6 621 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 J3QKU1 62 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PEX12O00623 359 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PRKNO60260 465 aaPredicted RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 PLIN3O60664 434 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PRKRAO75569 313 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 SLU7O95391 586 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 S100BP04271 92 aaPredicted RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 RBP1P09455 135 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 RNH1P13489 461 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 TSPAN8P19075 237 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 HIST1H1TP22492 207 aaPredicted RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 CXCR2P25025 360 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ITGA3P26006 1051 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SERPINB1P30740 379 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ARRB2P32121 409 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SLCO1A2P46721 670 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 UQCRFS1P47985 274 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 HTR6P50406 440 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PLA2G16P53816 162 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 MLLT10P55197 1068 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SLC26A5P58743 744 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 STXBP1P61764 594 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 RPS13P62277 151 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 HERVK_113P63132 956 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 BTN3A2P78410 334 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 GALNT1Q10472 559 aaPredicted RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 MFAP5Q13361 173 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 LAPTM5Q13571 262 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ZRSR2Q15696 482 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 ERCC6LQ2NKX8 1250 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PLEKHN1Q494U1 663 aaPredicted RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 MINDY4Q4G0A6 757 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 SFT2D3Q587I9 215 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 TNFAIP8L3Q5GJ75 292 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 DEPDC1Q5TB30 811 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 MED27Q6P2C8 311 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PAPD4Q6PIY7 484 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 TRABD2AQ86V40 505 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 LCA5Q86VQ0 697 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ZGRF1Q86YA3 2104 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 HPS6Q86YV9 775 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ZCCHC7Q8N3Z6 543 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 KIF2BQ8N4N8 673 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ACOT4Q8N9L9 421 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 FAM47BQ8NA70 645 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 OR4F6Q8NGB9 312 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 THOC3Q96J01 351 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 SERINC2Q96SA4 455 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 MTERF1Q99551 399 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 TUBB6Q9BUF5 446 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 ERVK-6Q9BXR3 956 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 RNF32Q9H0A6 362 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 OR51B5Q9H339 312 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 NOL11Q9H8H0 719 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 FARSBQ9NSD9 589 aaKnown RBP8.13□□□□□ -1.11
SMG6-216ENST00000575176 TBK1Q9UHD2 729 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 PLAAQ9Y263 795 aa8.13□□□□□ -1.11
SMG6-216ENST00000575176 MMACHCQ9Y4U1 282 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms