RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PHGDHO43175 533 aaKnown RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 NDUFS4O43181 175 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 FAM155BO75949 473 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 WDR47O94967 919 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 WISP3O95389 354 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 C1QAP02745 245 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 SERPINA7P05543 415 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 CYC1P08574 325 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PRR35P0CG20 571 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C8orf89P0DMQ9 161 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C1GALT1C1LP0DN25 315 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 NCF1P14598 390 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 ALOX12P18054 663 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 GNAZP19086 355 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 IL10P22301 178 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 GNLYP22749 145 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 HSD3B2P26439 372 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 AHRP35869 848 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 GGT5P36269 586 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 XCR1P46094 333 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 EFNA3P52797 238 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 RAB10P61026 200 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 ATP6V0D1P61421 351 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 GUCY2DQ02846 1103 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 EEF1A2Q05639 463 aaKnown RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 RGS1Q08116 209 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 MFAP5Q13361 173 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PCOLCEQ15113 449 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C18orf21Q32NC0 220 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 KBTBD12Q3ZCT8 623 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 MINDY4Q4G0A6 757 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 CRB2Q5IJ48 1285 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 CDKL4Q5MAI5 379 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 NIPAL1Q6NVV3 410 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C8orf74Q6P047 294 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 LINC00696Q6ZRV3 163 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 ABHD13Q7L211 337 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 TMPRSS11BQ86T26 416 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 CUZD1Q86UP6 607 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PDSS2Q86YH6 399 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 GPSM1Q86YR5 675 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 SHISA5Q8N114 240 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 TCAIMQ8N3R3 496 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 FAM26EQ8N5C1 309 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 FAM13CQ8NE31 585 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PLPP5Q8NEB5 264 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 TRPV3Q8NET8 790 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 NT5CQ8TCD5 201 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PPP4R1Q8TF05 950 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PSMF1Q92530 271 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C19orf60Q96EN9 201 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 PEX11GQ96HA9 241 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 UBXN10Q96LJ8 280 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 IMMP1LQ96LU5 166 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C16orf45Q96MC5 204 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 WDR77Q9BQA1 342 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 TUBB6Q9BUF5 446 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 VN1R1Q9GZP7 353 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 SPNS1Q9H2V7 528 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 RIC8BQ9NVN3 520 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 ASF1BQ9NVP2 202 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 CD274Q9NZQ7 290 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 C19orf25Q9UFG5 118 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 SCN3AQ9NY46 2000 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ESYT3A0FGR9 886 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CLEC18AA5D8T8 446 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CLGNO14967 610 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CHST10O43529 356 aa7□□□□□ -1.29
NUP88-205ENST00000572809 GALR3O60755 368 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 DNAJB6O75190 326 aa7□□□□□ -1.29
NUP88-205ENST00000572809 RDH16O75452 317 aa7□□□□□ -1.29
NUP88-205ENST00000572809 STK16O75716 305 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CBX6O95503 412 aa7□□□□□ -1.29
NUP88-205ENST00000572809 IGLV1-40P01703 118 aa7□□□□□ -1.29
NUP88-205ENST00000572809 UQCRHP07919 91 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SERPINA6P08185 405 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ZNF888P0CJ79 500 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 SMIM10L1P0DMW3 83 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CD1DP15813 335 aa7□□□□□ -1.29
NUP88-205ENST00000572809 CRABP2P29373 138 aa7□□□□□ -1.29
NUP88-205ENST00000572809 STX2P32856 288 aa7□□□□□ -1.29
NUP88-205ENST00000572809 HNF4AP41235 474 aa7□□□□□ -1.29
NUP88-205ENST00000572809 UQCRFS1P47985 274 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SLC6A12P48065 614 aa7□□□□□ -1.29
NUP88-205ENST00000572809 KCNC1P48547 511 aa7□□□□□ -1.29
NUP88-205ENST00000572809 AGTR2P50052 363 aa7□□□□□ -1.29
NUP88-205ENST00000572809 RAB8AP61006 207 aa7□□□□□ -1.29
NUP88-205ENST00000572809 AP2B1P63010 937 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SKP1P63208 163 aa7□□□□□ -1.29
NUP88-205ENST00000572809 REEP5Q00765 189 aa7□□□□□ -1.29
NUP88-205ENST00000572809 SRSF1Q07955 248 aaKnown RBP eCLIP7□□□□□ -1.29
NUP88-205ENST00000572809 ACTN3Q08043 901 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 NAB1Q13506 487 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ZNF169Q14929 603 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 NSDHLQ15738 373 aa7□□□□□ -1.29
NUP88-205ENST00000572809 ZKSCAN8Q15776 578 aaPredicted RBP7□□□□□ -1.29
NUP88-205ENST00000572809 WHAMMP3Q1A5X7 153 aa7□□□□□ -1.29
NUP88-205ENST00000572809 EIF2S3LQ2VIR3 472 aaKnown RBP7□□□□□ -1.29
NUP88-205ENST00000572809 DEFB134Q4QY38 66 aa7□□□□□ -1.29
NUP88-205ENST00000572809 PRR30Q53SZ7 412 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms