RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MKL2Q9ULH7 1088 aa14.92□□□□□ -0.02
CHD3-215ENST00000572750 SPENQ96T58 3664 aaKnown RBP14.91□□□□□ -0.02
CHD3-215ENST00000572750 TYROBPO43914 113 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 ETHE1O95571 254 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 NAGLUP54802 743 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 EEF1A2Q05639 463 aaKnown RBP14.91□□□□□ -0.02
CHD3-215ENST00000572750 TGM3Q08188 693 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 CASP8Q14790 479 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 TMEM35AQ53FP2 167 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 SGO1Q5FBB7 561 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 LIPMQ5VYY2 423 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 FRG2Q64ET8 278 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 ZNF793Q6ZN11 406 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 FRMD7Q6ZUT3 714 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 UBE3DQ7Z6J8 389 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 CA13Q8N1Q1 262 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 CDYL2Q8N8U2 506 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 EXD3Q8N9H8 876 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 KCNC2Q96PR1 638 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 FRG2BQ96QU4 278 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 KCNA7Q96RP8 456 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 HBEGFQ99075 208 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 ELOVL6Q9H5J4 265 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 LANCL2Q9NS86 450 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 FARSBQ9NSD9 589 aaKnown RBP14.91□□□□□ -0.02
CHD3-215ENST00000572750 FBXL4Q9UKA2 621 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 TSC22D4Q9Y3Q8 395 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 ABCA12Q86UK0 2595 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 FBN2P35556 2912 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 MED13Q9UHV7 2174 aa14.91□□□□□ -0.02
CHD3-215ENST00000572750 A0A088AWK7 358 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 AGPSO00116 658 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 PEX12O00623 359 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 UBFD1O14562 309 aaKnown RBP14.9□□□□□ -0.02
CHD3-215ENST00000572750 B3GALT2O43825 422 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 MLYCDO95822 493 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 FHP07954 510 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 ACPPP15309 386 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 ZNF10P21506 573 aaPredicted RBP14.9□□□□□ -0.02
CHD3-215ENST00000572750 SSR2P43308 183 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 RAP1GDS1P52306 607 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 EMP2P54851 167 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 MTTPP55157 894 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 DNAJB13P59910 316 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 IFT88Q13099 833 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 RUNX2Q13950 521 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 CFAP157Q5JU67 520 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 KIRREL2Q6UWL6 708 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 LANCL3Q6ZV70 420 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 CHSY3Q70JA7 882 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 EXOC3L1Q86VI1 746 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 FAM47BQ8NA70 645 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 MYRIPQ8NFW9 859 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 AGAP11Q8TF27 550 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 TBC1D20Q96BZ9 403 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 PGM2Q96G03 612 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 OR1F2PQ96R84 312 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 ING2Q9H160 280 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 PRDM7Q9NQW5 492 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 ADGRE2Q9UHX3 823 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 CENPEQ02224 2701 aa14.9□□□□□ -0.02
CHD3-215ENST00000572750 FAM227AF5H4B4 570 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 PSMD12O00232 456 aaPredicted RBP14.89□□□□□ -0.03
CHD3-215ENST00000572750 PLPP1O14494 284 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 B4GALT2O60909 372 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 PDYNP01213 254 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 IGHEP01854 428 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 MYZAPP0CAP1 466 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 C8orf89P0DMQ9 161 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 RNH1P13489 461 aaKnown RBP14.89□□□□□ -0.03
CHD3-215ENST00000572750 HIST1H1TP22492 207 aaPredicted RBP14.89□□□□□ -0.03
CHD3-215ENST00000572750 ALDH3A1P30838 453 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 KCNAB2Q13303 367 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 TUBB8Q3ZCM7 444 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 TNFAIP8L3Q5GJ75 292 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 DCAF10Q5QP82 559 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 DEPDC1Q5TB30 811 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 APLFQ8IW19 511 aaPredicted RBP14.89□□□□□ -0.03
CHD3-215ENST00000572750 OR11G2Q8NGC1 345 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 TSLPQ969D9 159 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 MAGEB10Q96LZ2 347 aaPredicted RBP14.89□□□□□ -0.03
CHD3-215ENST00000572750 IP6K3Q96PC2 410 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 SERINC2Q96SA4 455 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 CSF3RQ99062 836 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 CENPKQ9BS16 269 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 SHCBP1LQ9BZQ2 653 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 MID1IP1Q9NPA3 183 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 STK38LQ9Y2H1 464 aa14.89□□□□□ -0.03
CHD3-215ENST00000572750 TNRC6AQ8NDV7 1962 aaKnown RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 COX6A1P12074 109 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 GP1BBP13224 206 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 JAK1P23458 1154 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 ATP5A1P25705 553 aaKnown RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 HMOX2P30519 316 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 HTR6P50406 440 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 RRADP55042 308 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 FOXA1P55317 472 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 LIM2P55344 173 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms