RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 ZNF227Q86WZ6 799 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 SIAH3Q8IW03 269 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 FAM98AQ8NCA5 519 aaKnown RBP19.31■□□□□ 0.68
LITAF-205ENST00000570904 APCDD1LQ8NCL9 501 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 PDPRQ8NCN5 879 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 OR2L5Q8NG80 312 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 MAGED4Q96JG8 741 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 CSF3RQ99062 836 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 NPLQ9BXD5 320 aaPredicted RBP19.31■□□□□ 0.68
LITAF-205ENST00000570904 PITHD1Q9GZP4 211 aaPredicted RBP19.31■□□□□ 0.68
LITAF-205ENST00000570904 EHD1Q9H4M9 534 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 TINAGQ9UJW2 476 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 ZNF490Q9ULM2 529 aaPredicted RBP19.31■□□□□ 0.68
LITAF-205ENST00000570904 RNF112Q9ULX5 631 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 ASB1Q9Y576 335 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 CLDN16Q9Y5I7 305 aa19.31■□□□□ 0.68
LITAF-205ENST00000570904 CREBBPQ92793 2442 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 A0A088AWK7 358 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 ZNHIT1O43257 154 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 NME2P1O60361 137 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CCNT2O60583 730 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 MLYCDO95822 493 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 ZNF10P21506 573 aaPredicted RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 NME2P22392 152 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 GRNP28799 593 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 TRHRP34981 398 aaPredicted RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 SPRP35270 261 aaPredicted RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 KCNC1P48547 511 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CASP6P55212 293 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 SLC13A2Q13183 592 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 SLMAPQ14BN4 828 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 TRADDQ15628 312 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 ADPRMQ3LIE5 342 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CDKL4Q5MAI5 379 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 SP5Q6BEB4 398 aaPredicted RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 TRIM40Q6P9F5 258 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CYS1Q717R9 158 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CLNKQ7Z7G1 428 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 MRGPRGQ86SM5 289 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 SLC34A3Q8N130 599 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 CPSF7Q8N684 471 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 PPM1NQ8N819 430 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 B3GNT7Q8NFL0 401 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 FBXO25Q8TCJ0 367 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 MARVELD3Q96A59 401 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 KIAA1191Q96A73 305 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 PTCD3Q96EY7 689 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 SEC16BQ96JE7 1060 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 UBXN10Q96LJ8 280 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 ALG9Q9H6U8 611 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 ZNF223Q9UK11 482 aaPredicted RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 PTBP2Q9UKA9 531 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 FBXW2Q9UKT8 454 aa19.3■□□□□ 0.68
LITAF-205ENST00000570904 UTP11Q9Y3A2 253 aaKnown RBP19.3■□□□□ 0.68
LITAF-205ENST00000570904 FCHO1O14526 889 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 S100BP04271 92 aaPredicted RBP19.29■□□□□ 0.68
LITAF-205ENST00000570904 GSTA2P09210 222 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 EPORP19235 508 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 CASQ1P31415 396 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 HLCSP50747 726 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 CLCN2P51788 898 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 LIM2P55344 173 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 HSD17B7P56937 341 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 DLG1Q12959 904 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 EFTUD2Q15029 972 aaKnown RBP eCLIP19.29■□□□□ 0.684e-13■□□□□ 11.1
LITAF-205ENST00000570904 KRTCAP3Q53RY4 240 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 RNFT1Q5M7Z0 435 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 GRTP1Q5TC63 336 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 ABHD17CQ6PCB6 329 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 ZDHHC24Q6UX98 284 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 NCLNQ969V3 563 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 WDR34Q96EX3 536 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 F2RL3Q96RI0 385 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 EFCAB11Q9BUY7 163 aa19.29■□□□□ 0.68
LITAF-205ENST00000570904 TRIM45Q9H8W5 580 aaPredicted RBP19.29■□□□□ 0.68
LITAF-205ENST00000570904 COPS7BQ9H9Q2 264 aaPredicted RBP19.29■□□□□ 0.68
LITAF-205ENST00000570904 MYOCOSA0A1B0GUC4 107 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 CLDN4O14493 209 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 CDK2AP1O14519 115 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 HNRNPRO43390 633 aaKnown RBP19.28■□□□□ 0.68
LITAF-205ENST00000570904 SLC35E2BP0CK96 405 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 ZNF24P17028 368 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 TFEBP19484 476 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 MAGEA4P43358 317 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 MTTPP55157 894 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 HSF1Q00613 529 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 IRF8Q02556 426 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 CHIT1Q13231 466 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 ART3Q13508 389 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 TERF2Q15554 542 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 MTFR2Q6P444 385 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 RAPH1Q70E73 1250 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 TICAM1Q8IUC6 712 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 SPPL2CQ8IUH8 684 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 ZNF595Q8IYB9 648 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 ARMC10Q8N2F6 343 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 ZNF808Q8N4W9 903 aaPredicted RBP19.28■□□□□ 0.68
LITAF-205ENST00000570904 ADAMTS18Q8TE60 1221 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 FBF1Q8TES7 1133 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 TMEM125Q96AQ2 219 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms