RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PIP5K1BO14986 540 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 TMPRSS11DO60235 418 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 PIM1P11309 404 aaPredicted RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 PTPN4P29074 926 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 SSR2P43308 183 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 RPL14P50914 215 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 RAP1GDS1P52306 607 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 VWA2Q5GFL6 755 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 MRM1Q6IN84 353 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 ZCCHC7Q8N3Z6 543 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 ARFGAP2Q8N6H7 521 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 STT3BQ8TCJ2 826 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 CHTF18Q8WVB6 975 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 APIPQ96GX9 242 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 FAR2Q96K12 515 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 MAGEB18Q96M61 343 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 CENPKQ9BS16 269 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 NPLQ9BXD5 320 aaPredicted RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 GPR87Q9BY21 358 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 FAM117AQ9C073 453 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 TGIF2Q9GZN2 237 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 ROGDIQ9GZN7 287 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 DDX31Q9H8H2 851 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 WDR54Q9H977 334 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 GPN2Q9H9Y4 310 aaPredicted RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 CLK4Q9HAZ1 481 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 SLCO1B3Q9NPD5 702 aa17■□□□□ 0.31
COMMD4-222ENST00000568034 MKKSQ9NPJ1 570 aaPredicted RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 ZNF282Q9UDV7 671 aaPredicted RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 FARSAQ9Y285 508 aaKnown RBP17■□□□□ 0.31
COMMD4-222ENST00000568034 DMXL2Q8TDJ6 3036 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 A0A087WV48 116 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 A0A088AWK7 358 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 B3GALT2O43825 422 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 SKAP2O75563 359 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 JRKO75564 520 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 RSL1D1O76021 490 aaKnown RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 BMP10O95393 424 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 LINC00032P0C843 101 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 ZNF10P21506 573 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 PRPH2P23942 346 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 TPP2P29144 1249 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 XCR1P46094 333 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 LIM2P55344 173 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 SKP1P63208 163 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 RAE1P78406 368 aaKnown RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 TLE3Q04726 772 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 AP5B1Q2VPB7 878 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 RGS9BPQ6ZS82 235 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 COMMD6Q7Z4G1 85 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 NUDT13Q86X67 352 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 C1orf52Q8N6N3 182 aaKnown RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 DYDC1Q8WWB3 177 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 PEX11GQ96HA9 241 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 C3orf30Q96M34 536 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 C7orf26Q96N11 449 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 DCBLD2Q96PD2 775 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 CSF3RQ99062 836 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 RBCK1Q9BYM8 510 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 ACTL8Q9H568 366 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 COPS7BQ9H9Q2 264 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-222ENST00000568034 LANCL2Q9NS86 450 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 KCMF1Q9P0J7 381 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 ADAM29Q9UKF5 820 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 TCFL5Q9UL49 500 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 DAPP1Q9UN19 280 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 NUP210LQ5VU65 1888 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 LAMA5O15230 3695 aa16.99■□□□□ 0.31
COMMD4-222ENST00000568034 MAP1BP46821 2468 aaKnown RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 SLC28A1O00337 649 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 CHEK2O96017 543 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 GBAP04062 536 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 UMODP07911 640 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 ZGLP1P0C6A0 271 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 ITPKBP27987 946 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 HNRNPH2P55795 449 aaKnown RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 BTKQ06187 659 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 KIAA0040Q15053 153 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 PDCD2Q16342 344 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 MED25Q71SY5 747 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 LAPTM4BQ86VI4 370 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 HOMEZQ8IX15 550 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 OR2Y1Q8NGV0 311 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 KIAA1143Q96AT1 154 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 SLC45A3Q96JT2 553 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 CCNL2Q96S94 520 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 MAPKAP1Q9BPZ7 522 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 SOX17Q9H6I2 414 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 LYRM4Q9HD34 91 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 C14orf105Q9NVL8 296 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 SIRT5Q9NXA8 310 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 GPN3Q9UHW5 284 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-222ENST00000568034 KCND3Q9UK17 655 aa16.98■□□□□ 0.31
COMMD4-222ENST00000568034 ANKRD11Q6UB99 2663 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 CYR61O00622 381 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 LSM1O15116 133 aaKnown RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 HNRNPFP52597 415 aaKnown RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 RAB38P57729 211 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 RPS15P62841 145 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms