RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 LRRC38Q5VT99 294 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 PRAMEF8Q5VWM4 474 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 KCTD11Q693B1 232 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 METTL4Q8N3J2 472 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 LRRC15Q8TF66 581 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 CDKN2AIPNLQ96HQ2 116 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 AGAP3Q96P47 875 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 LGMNQ99538 433 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 IDI2Q9BXS1 227 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 CUEDC2Q9H467 287 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 RNPEPL1Q9HAU8 725 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 NLGN3Q9NZ94 848 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 BAIAP2L1Q9UHR4 511 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 RNF123Q5XPI4 1314 aa3.92□□□□□ -1.78
SHCBP1-206ENST00000567698 ATP6AP2A0A1C7CYW4 349 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 CCDC162PA2VCL2 907 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 K7EQG2 157 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 M0R296 226 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 TFECO14948 347 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 AKAP3O75969 853 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 GOSR1O95249 250 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 FGF19O95750 216 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 AOC1P19801 751 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 ETV5P41161 510 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 SLC1A3P43003 542 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 ELAVL2Q12926 359 aaKnown RBP3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 MSLNQ13421 630 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 MLF2Q15773 248 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 C3AR1Q16581 482 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 UPP1Q16831 310 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 AARDQ4LEZ3 155 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 NLRP14Q86W24 1093 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 CACUL1Q86Y37 369 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 OR4N5Q8IXE1 308 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 RNF149Q8NC42 400 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 OR13C5Q8NGS8 318 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 GPR148Q8TDV2 347 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 FAM46BQ96A09 425 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 AP2M1Q96CW1 435 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 OSBPL8Q9BZF1 889 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 ZNF665Q9H7R5 613 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 CTSZQ9UBR2 303 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 KLK13Q9UKR3 277 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 ETV7Q9Y603 341 aa3.91□□□□□ -1.78
SHCBP1-206ENST00000567698 C13orf42A0A1B0GVH6 325 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 C2orf92A0A1B0GVN3 265 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 C5orf51A6NDU8 294 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 ARHGEF33A8MVX0 844 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 MTRF1O75570 445 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 GRAP2O75791 330 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 TRIM49P0CI25 452 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 TRIM49CP0CI26 452 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 THEGLP0DJG4 465 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SERPINH1P50454 418 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC3A1Q07837 685 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 KIAA0141Q14154 515 aaPredicted RBP3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 RCN2Q14257 317 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF146Q15072 292 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 ACKR1Q16570 336 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SGCBQ16585 318 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 NEPROQ6NW34 567 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 PAQR6Q6TCH4 344 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 METTL7BQ6UX53 244 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 GPRIN3Q6ZVF9 776 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 FAM131BQ86XD5 332 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 IQCA1Q86XH1 822 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SFRP1Q8N474 314 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 GGHQ92820 318 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 PDLIM5Q96HC4 596 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 CCDC28BQ9BUN5 200 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 NUSAP1Q9BXS6 441 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 C3orf14Q9HBI5 128 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 SPG21Q9NZD8 308 aa3.9□□□□□ -1.79
SHCBP1-206ENST00000567698 TRBV5-4A0A0C4DH59 114 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 LRRD1A4D1F6 860 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 TRAFD1O14545 582 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 SYT7O43581 403 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 STBD1O95210 358 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 TBX6O95947 436 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 FKBP3Q00688 224 aaKnown RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 PAX8Q06710 450 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 STXBP2Q15833 593 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 SMU1Q2TAY7 513 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 EPC2Q52LR7 807 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 TMEM64Q6YI46 380 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 CYP4V2Q6ZWL3 525 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 PRSS42Q7Z5A4 293 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 MYPOPQ86VE0 399 aaPredicted RBP3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 PHC2Q8IXK0 858 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 CHPT1Q8WUD6 406 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 LIPHQ8WWY8 451 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 NABP1Q96AH0 204 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 ERGIC2Q96RQ1 377 aa3.89□□□□□ -1.79
SHCBP1-206ENST00000567698 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms